Coregonus clupeaformis (lake whitefish): 121548971
Help
Entry
121548971 CDS
T08357
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121548971 (med23)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121548971 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
121548971
NCBI-ProteinID:
XP_041716614
LinkDB
All DBs
Position
33:29621587..29655126
Genome browser
AA seq
1386 aa
AA seq
DB search
MAISMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSTLPPDSH
DQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALISSDNLEWERTQLWA
LTFRLIRKIIGGVDYKGVRDLLKALLDKIQTIPNTVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGTLSHWLLGSLMSDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLGMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCTASGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRYTTKVLERIGARALVAHVRTF
ADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFII
QLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMAYHKKYPEKLYFEGLAEQVNPPMQ
QQSHYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLY
NTLHYYERHLRERTNLKRKLVHAIMSSLKDNRAPGWCLSETYIKCGMNPREDNIWIPDDT
YYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKEVGNAL
LSVVLKSQPLVPRENITAWMNAIGLVITALPEPYWVVLQDRIVSVLGSPCLTTETEWVGY
PFALLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLL
YVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSQHLSYMDPICDFLYHIKYMFT
GDSVKDQVEKIILTLRPAMKLRLRFITHTSKMEPAAASVPQPSSSVSSPAPQSNPGPSNL
PLSVAQ
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcaatggaaacccagctccagagtatattcgaggatgtagtgaaaacagaa
gttattgaggaagcctttgcaggcatgtttatggacacacctgaggatgagagaacaaaa
cttatcagttgtctaggtgcctttcgtcagtattggagcactcttcctccggattcccat
gaccagtgtgtgcagtggattgtccggttcattcatggccagcacagccccaaacggatc
tcttttctctatgattgcctcgccatggcagtggaaaccagcctgttacctcccaggatg
gtgtgtcaggctctcataagctcagataacctggagtgggagcggacacagttatgggcc
ttgacttttcgactcatacggaaaatcatcggtggtgtggattacaagggagttagagat
ctactgaaggctctgctggacaagattcagaccattcccaacaccgttagctcagcagtg
gtccagcagctgctagctgcccgagaggtggtggagtacatcctcgacaggaacgcgtgc
ctcctgcctgcctactttgccattacagagatcagaaaactctatcccgaggggacgttg
tcacactggcttctgggcagtctcatgtcagattttgttgacagctttcggcccactgca
agaattaactccatctgtgggagatgcagcctccttccagtggtcaacaactctggagct
atctgcaactcctggaagctggaccccaccacgttacgcttccctctcaggggcatgctg
cccttcgacaaggacctgtttgaaccacagacagggctgctgcgatatgtgctggagcag
ccctactctcgagacatggtctgcaacatgttagggctcaacaagcagaccttgaacatt
gctcagcacaagcagcgctgcccggtgctcgaggaccagctggtggacctggtggtgtac
gccatggagcgctcggagaccgaggagcagtttgacgatggcggcaccagccagctcctg
tggcagcacctctccagccagctcattttctttgtgctcttccagttcgccagcttccca
cacatggtgctctctcttcaccagaagctggctggtcgaggcctgatcaaaggcagagac
cacctcatgtgggtcctcctccagttcatatctggcagcatccagaagaacgccctggct
gactttctccctgtcatgaagctgttcgatctgctctacccagagaaagagtgcatcccg
gtgccggacatcagcaagccccagtcgacccacgccttcgccatgacatgcatctggatc
cacctgaaccgcaaggctcagaacgacaactccaagctgcagatccccatcccccactcc
ctcaagctgcatcatgagtttctccagcagagcctgaggaacaagtccctggggatgaca
gactacaagatcgccctgctgtgtaatgcctactccactaactccgagtgcttcactctg
cccatgggcgtgctggtggagactatctatggcaacggcagcatgcgcatcaccctgcct
ggcaccaactgtaccgcatcaggctctgtcacaccactacccatgaacctcctggactcc
ctcaccgtccacgccaagatgagcctgatccatagcatcgccacgcgggtgatcaagttg
gcccacgccaagtccagcatcgccctggccccagccctggtggagacctacagcagactg
ctggtctacatggagatagaatctctgggcatcaaaggattcatcagccagctcctgccc
aatgtgttcaagtcccacgcctggggcatccttcacactctgctggagatgttcagctac
cgtatgcaccacatccagccccactaccgcgtccagctgctcagtcacctgcactcgctt
gctgccgtgccccagaccaaccagaaccagctgcacctctgtgttgagagcacagcgtta
aggttgatcacagcgttggggagttccgaggttcagcctcagtttacccgcttcctcagt
gaccccaaaacggtgctgtctgctgaatctgaggagctcaatcgtgccctcatcctcact
ctggccagagccacccacgtcacagatttcttcacaggctctgactccatccagggtacg
tggtgtaaggacatcctgcagaccatcatgaactttactcctcataactgggcctctcac
acccttagctgcttccctgctcctcttcaggcgttcttcaagcagaacaacgttccccag
gagagccgcttcaacctgaagaagaacgtggaggaggaatacaggaagtggaagagcatg
accaatgagaacgacatcatcacccacttctccatgcagggatcgccgcccctcttcctg
tgtctgctttggaagatgctgctggagactgaccacatcaaccagatcggcttcaggtac
accacaaaggttctggagaggatcggggcgcgggcgctggtggcccatgtcaggacgttt
gcagacttcctggtctatgagttctccacgtcggccggtggccagcagctcaacaagtgt
atcgagatcctcaacgacatggtgtggaagtacaacattgtcacgctggacagactcatc
ctgtgtctggccatgaggagtcacgagggtaatgaggcccaggtctgctacttcatcatc
cagctcctcctcctcaagcccaacgacttccgcaaccgtgtctccgacttcgtcaaggag
aacgcccccgagcactggctgcagagcgactggcacaccaagcacatggcctaccacaag
aaatacccggagaagctgtactttgagggcttggcagagcaggtgaacccacccatgcag
cagcagtcccactacctgcccatctactttggtaacgtgtgcctgcgcttcctgcccgtc
tttgacattgtcatccatcgcttcctggagctgctgcccgtctccaagtccctggagacc
ttactggaccacctgggaggactctacaagttccacgaccgtccggtgacctacctgtac
aacacgctccactactacgagcgtcacctgcgtgaacgcaccaacctgaagaggaagctg
gtgcacgccatcatgagctctctgaaggacaaccgggcgccaggctggtgcctgagtgag
acctacatcaagtgtggcatgaacccccgtgaagacaacatctggatccccgatgacacc
tactactgcaagctcatcggacgcctcgtcgacacgatggctggcaagtcccccgggccg
ttccccaactgtgactggagattcaacgagttccccaacccggccgcccatgctctccac
gtcacctgtgtagagctgatggccctagcagtgcccggcaaggaggtgggcaacgccctg
ctcagcgtcgtcctcaagagccaaccgctggtgcctcgggagaacatcacagcctggatg
aacgctatcggcctggtgatcactgccttgcctgagccttactgggtggtcctgcaggac
cgtattgtgagtgtgctgggcagtccgtgcctcaccacagagactgagtgggtggggtac
cccttcgcgctgctggacttcaccgcctgccaccagtcctactccgagatgtactgcagc
tacgtgctggccctggcccacgccgtgtggcaccactccagcatcggacagctctccctt
attcccaagttcctgtctgaggtgctgaagcccatagtgaagaccgagttccagctcctc
tacgtgtaccacctggtggggcccttcctccagcgcttccaacaggagaggacccgctgc
atgctggagattggagtggcattctatgagatgctacaggctgtggaccagcacagtcaa
cacctgtcctacatggaccccatctgtgacttcctctaccacatcaagtacatgttcacc
ggggacagcgtcaaagaccaggtggagaagatcatcctgaccctgcgtccggccatgaag
ctccgtctgcgtttcatcacccacactagcaagatggagcctgcagctgccagcgttccc
cagccctcctcctctgtgtcctcacccgccccacagagcaaccccggtccctccaacctc
cccctgtctgtggcccagtaa
DBGET
integrated database retrieval system
