Coregonus clupeaformis (lake whitefish): 121548975
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Entry
121548975 CDS
T08357
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121548975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121548975
03036 Chromosome and associated proteins [BR:
cclu03036
]
121548975
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121548975
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121548975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Chromo_MORC2_6th
MSL3_chromo-like
DUF4882
Motif
Other DBs
NCBI-GeneID:
121548975
NCBI-ProteinID:
XP_041716647
LinkDB
All DBs
Position
33:complement(29900930..29946931)
Genome browser
AA seq
815 aa
AA seq
DB search
MDESKNAANAATNAAAPDFDVYGAMDWNDGVGTLPGSELKFKVNEFGVLEVLTEEGEDES
VKKAHATITWAVPTAQEALSDSAAVAVKVKEEMQEGQWAQRGLVCVRCQRKGSPVDFLSD
GLHCSERCLQQDQQDELMLKKEVLKSNGEVVGVSRKRPLQQDKESLADKMDTTEVPPEDD
DEDYEEKDSRKTTRGAPRGRRKRRGDAALLRHTVPYGGKKKSWCWASYLEQDKAIAAPTK
LFKEHQAFPQSKNGFRVGMRLEGVDPEHPSMYCVLTVAEVSGHRIRLHFDKYSDYYDFWV
NSNSADIHPVGWCEKTGHKLHPPKGIKDEEFSWSSYIKLSKAQAAPKALFENQNMTVTPL
GFRIGMKLEAIDKKNPSFICVATVTDMVDSRFLVHFDNWDESYDFWCDATSPYIHPVGWC
QDNDRILTKPPGYPNVKNFSWEKYLEETNSSPAPARAFKVKPPHSFQPLMKLETVDKRNP
MLVRVATVVDTDDHRIQIHFDGWTDEYDYWVDTDSPDIHPAGWCAKTGHPLQPPINPQEL
FESSEQGGCPTPGCKGVGHIKGARYSGHHSAVGCPYSDININKDSVLPDRLSGEMPGSGG
LGRPRRAEPNPDINPAPALTADKHLIANPNHLDKTCRGEKAGSAVASAMERPIKKPAGTE
PKRRVGRPCKQRKVEEPVEEGIKSEVSCIMETKVELTLQQALHQSVFMPCTSPSPSSTPF
CWDQHSKLLPTVAGITSSKVASWTVEEVIEFIQGLPGCKEHVHTFRDEQIDGEAFLLLTQ
VDLVKIMSIKLGPAIKIYNSILMFKTAEESACNEL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctaaaaatgctgcaaatgcagctacaaatgcagcagcccctgattttgat
gtgtatggtgccatggactggaatgatggtgttggaaccctacctgggagtgagctgaag
tttaaggtgaatgagtttggagtcttggaggtcctaacagaggagggagaagatgagagt
gtgaagaaagctcatgccaccattacatgggcagtgcccactgctcaggaggccctctca
gacagtgcggcggtggcggtgaaagtgaaagaggagatgcaggaggggcagtgggcccag
agaggcctggtatgtgtgcgctgccagaggaagggctcccccgtggacttcctgtctgat
ggcctccactgcagcgagcgctgtctgcagcaggaccagcaggatgagctgatgctgaag
aaagaggttttgaagagtaatggggaggtggtgggggtcagccgtaagaggcctctgcag
caggacaaggagagcctagctgacaagatggacaccacagaggtcccgcctgaggacgat
gatgaggactatgaggagaaagatagcaggaagacgacgcgtggagctccgcgaggcagg
aggaaacggaggggggatgcagccctcctgagacacactgttccatatggaggtaagaag
aagtcttggtgttgggcctcatatctggagcaggacaaagccattgctgcccccactaaa
ctgttcaaagagcaccaggccttcccccagagtaagaatggattccgggtggggatgagg
ctagagggagtggacccagagcacccctccatgtactgtgtgctcactgtagctgaggtt
tcaggacacagaatacggcttcactttgacaagtactcagactactatgacttctgggtg
aattccaactctgcagacattcaccctgtgggatggtgtgagaaaacaggacacaagctt
cacccccccaaaggtataaaggatgaggagttcagctggtcgtcgtacatcaagctgagc
aaagcccaggcagctcccaaggccctgtttgagaatcagaacatgactgtcactccttta
ggattcagaattgggatgaagctggaggccattgacaagaagaacccctccttcatctgt
gttgccacagtaacagacatggtggacagtcgattcctggtgcactttgataactgggat
gagagctacgacttctggtgtgatgcaaccagtccatacatccatccagtgggctggtgt
caagacaacgacaggattctcaccaagcctccaggttaccccaatgtcaagaatttctcc
tgggaaaagtatctggaggagaccaactcgtcaccggctccagccagggcttttaaagtg
aaacccccccacagcttccagccactcatgaagctggagacggtggacaagaggaacccc
atgcttgtcagagtggccaccgtggtggacactgatgaccacaggatccagatccatttt
gatggctggacggatgagtatgactactgggtggacacagacagtccagacatccaccct
gcgggctggtgtgctaagactggccaccccctccagcccccgatcaatccacaggagctg
tttgagtcgtctgagcagggcggatgtcccaccccagggtgtaaaggtgtgggccacatc
aaaggagcccgctactctggccaccacagtgcggtgggatgcccatactctgacatcaac
atcaacaaggactcagtgctgccagaccgtctgagtggtgagatgccaggatcaggagga
ctgggccgaccccgacgggcagaacccaacccagatatcaacccagctccagctctcact
gcagacaagcacttaatcgccaacccaaatcacctggacaagacttgcaggggcgaaaag
gctggcagcgcggtggcgagtgccatggagcggccaatcaagaaacctgccggcacagag
ccaaaaaggagggttgggcggccatgcaagcagaggaaggtagaggagccggtggaggag
gggataaagagtgaggtgtcatgcataatggaaaccaaagtagagctgacactacaacaa
gcccttcaccagtcagtgttcatgccatgcacttcgccatcccctagcagcactcctttc
tgttgggaccagcacagcaagctactgcccactgtggctggcatcacttcaagcaaagta
gcttcgtggacagtggaggaggtgattgagttcatccaaggtcttccaggctgtaaggaa
cacgtgcacacattcagagatgagcaaatagatggtgaagccttcctgctgttgacccag
gttgacttggtgaagatcatgagcatcaagctgggtccagccattaagatctacaactcc
atcttaatgttcaagacggcggaggaatctgcatgtaatgaactctaa
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