Coregonus clupeaformis (lake whitefish): 121548982
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Entry
121548982 CDS
T08357
Name
(RefSeq) syntaxin-7
KO
K08488
syntaxin 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04140
Autophagy - animal
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121548982
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121548982
04140 Autophagy - animal
121548982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121548982
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121548982
Membrane trafficking [BR:
cclu04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
121548982
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121548982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
TOP_N
DUF4191
PCF11_charged
DASH_Dad4
DUF6584
baeRF_family2
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121548982
NCBI-ProteinID:
XP_041716668
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All DBs
Position
33:complement(32365456..32371629)
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AA seq
260 aa
AA seq
DB search
MAYQYGKVQDPNVLTQTIISNIQKITQQTSEIQKIVNQLGTPQDTTELRQQLQQKQQNVN
HLAKETDRCMKEFGALPVTTEQRQRKIQKDRLINDFSNALANFQKTQRQAAQKEKEFVAR
VRAESRVSGGFPDDSFGGNGNPFESGGQVQSQSQEVAITEEDLQLIQERETSIRQLESDI
TDINEIFKDLGMMVHEQGDMIDSIEANVETADLHVQNATQQLTQAADYQRKSRKKICILI
VVLVVLAFVIGLIIWASVKG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccagtacggaaaagtgcaggacccaaatgtgcttactcagacgataatctcc
aacatccagaagataacacaacaaacatctgaaatacagaaaattgtgaatcagttggga
acaccacaagacacaactgagctcagacagcaactgcagcagaaacagcaaaatgtcaac
caccttgccaaagaaacagaccgatgtatgaaggaatttggcgcattgcctgtcacaact
gaacagcgccagagaaagatccagaaagatcgtcttatcaacgacttctccaatgcactg
gccaatttccaaaagacacagagacaggctgctcagaaagagaaggagtttgttgctaga
gtccgtgccgagtccagagtgtcgggtggctttcctgacgacagctttggaggaaatgga
aacccctttgaaagtggggggcaggtccagtcacagtcccaggaggtggccatcaccgag
gaggacctgcagctcatccaggagagagagacttccatcagacagctagagtctgatatt
acagatataaatgaaatatttaaggacttgggaatgatggtccatgagcagggtgatatg
atcgacagtatagaggccaatgtcgaaactgccgaccttcatgttcagaatgccacccag
cagttaacacaggctgcagactatcagcgcaaatctagaaagaagatctgcattctcatt
gttgttctggttgtacttgcttttgtcattggtttaatcatctgggcatcagtcaaagga
tga
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