Coregonus clupeaformis (lake whitefish): 121548989
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Entry
121548989 CDS
T08357
Name
(RefSeq) katanin p60 ATPase-containing subunit A1 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121548989
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
121548989
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121548989
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_14
AAA_5
DUF8168_C
AAA_33
TIP49
NPHP3_N
nSTAND3
AAA_16
Mg_chelatase
AAA_22
AAA_7
IstB_IS21
AAA_2
AAA_28
RNA_helicase
AAA_24
ABC_tran
PhoH
TsaE
SRPRB
AAA_17
AAA_18
AAA_30
TPR_1
Motif
Other DBs
NCBI-GeneID:
121548989
NCBI-ProteinID:
XP_041716677
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All DBs
Position
33:complement(32166820..32171884)
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AA seq
522 aa
AA seq
DB search
MNSVQDMTPELTASNINRRFLGAVLHFMYRQCNRMSLHEINENVKLAREYALLGNYSSAI
VCYRGVLEQIKKYIFTVRDSSFQQRWQQVWQEINEENNQVQEIMTTLESFQLETTPSKPP
SNQEGIHDIWPVQVERRSSPLPVRRPPVPYKDSKPHNNRLSVAGVRAQHRQSPRGANGDR
AKPLKGKEKKEAPAKSKDDKNKAEVSEKEVKRFDGQGYDKDLIEALERDIISQNPNVKWD
DIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECRTT
FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSMCSRRGTSEEHEASRRV
KAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVE
LLRINLKELELANDVDMAKIAEQMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNIS
RAEMHMPTTMEDFESSLKKVSKSVSASDLEKYEKWIEEFGSC
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagttcaggatatgacgcctgagttgacggcttcaaacattaataggcggttc
ctgggtgcggttctacactttatgtaccgtcaatgcaacagaatgagtctgcatgagatc
aatgaaaacgtgaaacttgctcgagagtacgccttgcttgggaactacagttctgctatt
gtttgctatcggggagtacttgaacaaatcaagaaatacattttcacagtacgggacagt
agcttccaacaaagatggcaacaggtatggcaggagataaacgaagaaaacaatcaggtt
caagaaataatgacaactctagaaagttttcaactggagaccaccccatccaaaccacca
agtaatcaagaaggcattcatgacatatggcccgtacaagtagagcgcagatcctctcct
cttccggttaggaggcccccggttccctacaaagacagtaaaccacacaacaaccgcctg
agtgtggctggtgtgcgggctcagcatcgccagtcaccacgtggggccaatggggaccga
gccaaacctttgaagggcaaggaaaagaaagaggccccagccaaatcaaaagacgacaag
aacaaagctgaagtctcagagaaagaggtgaagaggtttgacgggcaaggatatgacaaa
gaccttattgaggccctggagagagacatcatatcacagaaccccaatgtcaaatgggat
gatattgcagacttggaagaagcaaaaaagcttttgaaagaagctgttgtgctacccatg
tggatgccagagtttttcaaaggaatacgaagaccatggaagggtgtgcttatggtgggt
cctccaggcacaggaaagactcttctggccaaagccgtcgccacagagtgcagaaccaca
ttctttaacgtctcgtcctctactctcacttccaagtacagaggagagtctgaaaaactg
gtccgccttctatttgaaatggcccggttctatgcccccaccaccatattcattgatgag
attgactccatgtgcagccgcagaggaacgtcagaggaacatgaggctagccggcgggtg
aaggcagagctgctggtccagatggatggtgtgggaggggcatcagataatgaggatccc
tctaagatggtgatggtgctggcagccactaacttcccctgggacatcgatgaggctctg
aggcgacgtctggagaagagaatctacatccctctgccttcagctaagggcagagtggag
ctgctgaggatcaacctaaaggagctggagctggccaatgatgtggacatggcaaagata
gcagagcagatggagggctactcaggagcagacatcaccaatgtgtgcagggacgcctct
ctaatggccatgcggcgaaggatcgaggggctgacgccagaggagatccgtaacatctcc
agagcagagatgcacatgcccaccaccatggaggattttgagtcttctttgaagaaagtg
tccaagtctgtatcagcttccgatctagagaagtatgagaagtggatcgaagagtttggc
tcctgctga
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