Coregonus clupeaformis (lake whitefish): 121548994
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Entry
121548994 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin Nup37
KO
K14302
nuclear pore complex protein Nup37
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121548994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121548994
03036 Chromosome and associated proteins [BR:
cclu03036
]
121548994
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121548994
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121548994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
EIF3I
Motif
Other DBs
NCBI-GeneID:
121548994
NCBI-ProteinID:
XP_041716687
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MTFRTFKKLPSKQPPTHIAREKGVSPHPSWKNQTSLCLSGGKVKPNSKYTGHKHHQNTFS
MEDSGRGASYTVPCDDYVHVVEFSPFDSGSAASLLAYGGNQYVVVGTCRFQEEDMEVEGV
EFTTLRVFHHALRVDCLAWSPESRLDKLPQLIRFCTAAADRKVRLLTSDLQNKHEVKVME
GHTSYINHLVFEPTEGEQIASVSDDHTCRVWDLEGNETTTFRLRSPGVSVCWHPEDVFKL
MVAEKKGTIRFYDLVTQQAILSLDCGQSPLMSADWCLTNTIKVGAVTGSDWVIWDITRSS
YPQEKRPAHVERAGNFRWSRANENLFSTTGCPGKISSQLLVHHLGHPQPVMIGSATVGAG
LSWHRSLPLCVIGGDRKLSFWMTEM
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcgcacatttaaaaagcttccatctaaacaacccccgacccacattgcccgg
gagaagggtgtttcaccccacccttcctggaaaaaccagacaagtctgtgtttgtctggt
ggtaaagtcaaaccaaacagtaaatacaccggacataagcatcaccaaaatacatttagc
atggaggactcaggtcggggagccagctacacagtaccctgtgacgactacgtccatgtg
gtggagttcagcccctttgacagtggctcagctgcgtccctcctggcctatggaggaaac
cagtatgtggtggtcggtacctgccgcttccaggaggaggacatggaggtagagggggtt
gaattcaccacactgcgtgttttccatcatgcgttacgtgtggattgccttgcatggagc
cctgagtctcggctggacaagctgccccaactcatcagattttgcactgcagcagcagac
agaaaagtgaggctgttgacttctgatcttcagaataaacatgaagtcaaggtgatggag
ggtcacaccagctacatcaaccacttagtgttcgaacccacagagggggaacaaatcgct
tcggtcagcgacgaccatacatgcagggtgtgggacctggagggcaatgaaaccactaca
ttcagactacgctcccctggcgtcagtgtgtgctggcatcctgaagatgtcttcaagctg
atggttgccgagaagaaggggacgatccgcttctatgacctggttacccagcaggccatt
ctttctctggattgtggccagtcgccgctcatgtcggccgactggtgtctcaccaacacc
atcaaggtgggcgcggtgacgggcagcgactgggtcatctgggatatcacccgctccagt
tacccacaagagaagaggcctgcccatgtagaacgagcaggaaacttcaggtggtctcgg
gccaatgagaatctcttctccacaacaggatgtccaggcaagatcagcagtcagttacta
gtgcatcacttgggtcacccgcagcccgtgatgatcggatcagccacggtgggggcgggt
ctaagctggcacaggtccctcccactctgtgtcattggcggtgaccgaaagctctctttt
tggatgacagaaatgtaa
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integrated database retrieval system
