Coregonus clupeaformis (lake whitefish): 121548996
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Entry
121548996 CDS
T08357
Name
(RefSeq) TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1
KO
K04404
TAK1-binding protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121548996
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121548996
04621 NOD-like receptor signaling pathway
121548996
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121548996
09171 Infectious disease: bacterial
05132 Salmonella infection
121548996
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Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RanBP
Sos7
Motif
Other DBs
NCBI-GeneID:
121548996
NCBI-ProteinID:
XP_041716684
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Position
33:32041530..32116874
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AA seq
803 aa
AA seq
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MAQGSHQIDIQVLHDLRQKFPEVPEGVVSQCVLQNNNNLDACCEYLSQVSPGYLYSEGGN
LNNTDDPSFIRLRNHMTQLNLGLQSQFQNVHAAPGQDSLRMNGSRTLSHSLSDGPLQTGQ
PPNSDFFQQEPQSAPVQVPSSLNVFGVMEPTRKPQPPQHLGLYQLGGKGQSMGQHGQQTP
RFNPITVTLAPNIQTGRNTPTSLHIHGGPHTQSGLSSPQGNSIYIRPYVTQPGGTTRQSQ
QQQAGRAQYSPTSQAQQQIYQISHPSSLPGSWTGPSSQQHQHGSSHTSQHQSQGHQTSHV
YMPISSPTNPQAPSSIFQAPSGGQTSSSGASSSVMPSGMSSFSQYNIQNISTGPRKNQIE
IKLESPQRSNSTTTTAMLRTSSSPRSNSSTSSSCPSSSSSVGAAPGPTTTPLSIGGPGLS
RSQPTVYISASPPTSATTTPSDEAVMAPSGSRSQPKFYITANNDDGGGRNPPTVYISAQP
PPHGSQGARNMGGQVSMGPAYIHHHPPKSRASMGGGGAATSPRVVVTQPNTKYTFKITVS
PNKPPAVSPGVVSPTFEATNLLSLPSDHHFVEPEPHHLSDPLSAHRERPSEPCSLSMGSD
DAAYTQALLVHQKARMDRLWHELDLKKKKLEKLKEEVNEMENDLTRRRLERSNSQSQIPS
IEEMQQLRCKNRILQIDIDLLTKEIDLLQTRGPHFNPSAIHNFYDNIGFLGPVPPKPKGT
LCVEPEGQGTDRRTFHVTSTLTMEPSSAPPPPAALPLESSSKSVKTVADQEEDEGTQWSC
TACTFLNHPALNRCEQCEFPRHF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcccagggaagccaccaaattgacattcaggttttgcacgacctgcggcagaagttc
cctgaagttccagagggtgttgtgtcccagtgtgttctgcagaacaacaacaatttggac
gcctgttgtgagtacttgtctcaggtgagcccgggctacttgtacagcgaaggaggcaac
ctcaacaacaccgacgaccccagcttcatcaggctccgcaatcacatgacccagctgaac
ctgggcctgcagtctcagtttcagaatgtgcatgcggccccgggacaggacagcctgagg
atgaacggcagcaggactctgtcccacagcctgagcgacgggcccctccagacaggacag
ccccccaacagtgacttcttccagcaggagccccagtcagcccccgtgcaggtaccctcc
agcctcaatgtgtttggcgtgatggagcccacgcgcaagccccagccgccccagcacctg
ggactctaccagctggggggcaaaggacagtccatgggccagcatggccagcagacgccc
cgcttcaaccccatcaccgtcaccctggcccccaacatccagacgggtcgcaacaccccc
acctctttgcacatacacggcgggccccatacacagtccggcctgagcagtccacagggt
aactctatctacatcaggccttacgtgacccagcccggcggtacgacccggcagagccag
cagcagcaggcgggtagggcccagtacagccccacctcccaggcccagcagcagatctac
cagatctcccatccctcctcactgcctggctcctggacaggcccttcctcccagcagcac
caacacggctcctcacatacctcacagcaccagtcacagggccaccagacctcccatgtc
tacatgcccatcagctcccccaccaacccacaggccccctcctccatcttccaggccccc
tctggaggtcagacctcctcctctggtgcctcgtcctcggttatgccctccggcatgtcc
tccttcagccagtacaacatccagaacatctccaccggaccgcgcaagaaccagatagag
atcaaacttgaatctcctcagaggagcaactccaccacgaccacggccatgctgcgcacc
agcagcagcccccgctccaactcctccacctcctcctcctgcccgtcatcctcctcctct
gtcggggcagcccctggccccaccactacccccctgtccatcggaggcccgggcctgagc
cgcagccagcccactgtttacatctctgccagcccgcccacctctgctactacaaccccc
tctgacgaggccgtcatggccccatccggctctcgctcccaacccaagttttacattact
gctaataacgatgatggtggaggcagaaaccccccaaccgtctacatctctgctcagcct
cctccgcacgggtcccagggggcccggaatatggggggccaggtgagcatgggccccgcc
tacatccaccaccacccacccaagtcccgtgcgtctatgggagggggaggcgcggccacc
tcgccccgagtggtggtcacccagcccaacaccaagtacactttcaaaatcacagtgtcc
cccaacaagccccctgcagtgtcccctggcgttgtttcccctacctttgaggccactaat
cttcttagcctcccctcggaccaccattttgtggagccggagccccatcatctctcagac
ccgctgtctgcacacagggagaggcccagcgagccatgcagtctcagcatgggttcagac
gacgcagcatacacacaagccctgttggttcaccagaaggcccgtatggaccggctgtgg
catgagctggacttgaagaagaagaagctggagaagctaaaagaggaggtcaacgagatg
gagaacgacctgaccaggagacggctagaacgatccaactcccagtcccaaattccctcg
attgaggaaatgcagcagttgcgatgcaaaaacaggatactgcagatcgacattgacctt
ttaaccaaagaaatcgatctccttcaaacaagaggaccacactttaatcccagtgccatt
cataacttctatgacaacattggattcctaggtcctgtcccacccaaacccaaaggtact
ttatgtgttgagccagagggtcaggggacagacagaagaacatttcatgtcacctccacg
ctaaccatggagccctcctctgcccctcctccccctgctgctctccccctggagtcgagc
agtaagagcgtaaagactgtagcagaccaggaggaagacgaggggacgcagtggagctgc
acggcctgcaccttcctcaaccaccccgccctcaaccgctgtgaacagtgcgagtttcca
cggcacttctga
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