Coregonus clupeaformis (lake whitefish): 121549029
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Entry
121549029 CDS
T08357
Symbol
rngtt
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121549029 (rngtt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121549029 (rngtt)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
121549029 (rngtt)
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
121549029 (rngtt)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
121549029 (rngtt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
Y_phosphatase
PTP-NADK
SPN1_m3Gcap_bd
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
121549029
NCBI-ProteinID:
XP_041716752
LinkDB
All DBs
Position
33:33266100..33443646
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AA seq
602 aa
AA seq
DB search
MSHTGPPPRWRNCPRRGQPVAGKFLPMKTMLGPKYDDKVPEENRFHPSMLSQYLKSLKVK
MGLLVDLTNTTRFYDRNEIEKEGVKYVKLQCKGHGECPSAETTAKFIRLCEHFMEKTPTE
LIGVHCTHGFNRTGFLICAYLVEKLDWSVEAAVAAFAQARAPGIYKGDYLKELFRRYGDA
EDAPAAPVMPEWCFDDDGDQDDDGNVIGQESQSGPSSSESAPGKRRKERLKFGAIFVEGV
TVKGVTQVTVQPKLAEIQRKCQEFAEWEKSGFPGAQPVSMDRRNLRFLEQNPYKVSWKAD
GTRYMMLINGKNEVHMIDRDNSVFHIANLEFPFRKDLRVHLANTLLDGEMIIDKVNGQPV
PRYLIYDIIKFNGQPVGQCDFNIRLLCIEKEIISPRMEKMKTGQIDKTKEPFSVRNKPFF
DIHAARKLLEGSFTSQVSHEVDGLIFQPCGKYKAGRCDDILKWKPPSLNSVDFRLKITKV
GGEGLLPQTVGLLYVGSYDMPFAQMKASKELKQYDNKIIECSFNNNTWVFMRQRVDKSFP
NSYDTAMAVCNSIQHPVTKENLYEFLDRCALGAQGQNRKRPSDPDTELMPPPAPKRPNRA
AP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacactgggcctccccctcgatggcggaattgtcctagaagaggacaacctgta
gcaggtaaattcctgccaatgaaaactatgttgggccccaagtatgatgacaaagtgcca
gaagagaacaggtttcatccaagcatgctatcccagtatttaaagagtctaaaggttaaa
atgggtttgcttgttgatctaacaaacactactcgcttctatgaccgcaacgagatcgaa
aaagagggtgttaaatatgtgaagcttcagtgcaaaggccatggagagtgtccttcagca
gagaccactgcgaagttcatcagactatgtgagcacttcatggagaagactccaactgaa
ttgataggtgtccactgcactcacggcttcaatcggacaggctttcttatctgtgcatac
ctggtagagaagttggactggagtgtcgaggcggcggtggctgcgttcgcccaggcccgc
gcccctgggatctacaaaggcgactacctcaaggagctcttccgtcgctatggagacgcg
gaagacgcgcccgccgcccccgtgatgccagagtggtgcttcgacgacgatggcgaccag
gacgacgacggcaacgtgattggccaagagtctcagtcaggcccctcctcctctgagtcg
gcgccggggaaacggaggaaggagagactaaaatttggtgctatattcgtggagggggtc
acagtgaaaggcgtcacacaggtcaccgtacagcctaaactggccgagatccaacggaag
tgtcaggagtttgcggaatgggaaaagtccgggtttccaggtgctcagcccgtgtccatg
gacaggcggaaccttcgctttctggaacagaatccctacaaggtcagctggaaggccgac
ggcacacggtatatgatgctgataaatgggaagaatgaggtgcacatgattgacagagac
aactcggtgttccacatagccaacctagaattcccctttcggaaagacctccgcgttcac
ttagccaacacactacttgacggggagatgattatcgacaaggtgaacggccagcccgtc
ccgcgctacctgatctatgacatcatcaaattcaacggtcagccggtcggtcagtgtgat
ttcaatattcggctgttgtgcatagagaaagagataatctcccctcggatggagaagatg
aagacgggacagatcgacaagaccaaggagcccttcagtgtcaggaacaagccattcttt
gacatccacgcagcacgaaagctcctggaaggcagcttcacgtcccaggtcagccatgaa
gtcgacggccttatcttccagccgtgtgggaaatacaaagctgggcgatgtgatgacatc
ctcaagtggaagccgcccagcctcaactccgtagacttccgcctcaagatcaccaaagtc
ggaggagaagggttgctcccccagactgtcggattgctctacgtcggcagctatgacatg
ccttttgcacagatgaaggcctccaaggagttgaagcagtacgacaacaagatcatcgag
tgctcctttaacaacaacacctgggtgttcatgagacagagggtagacaagagcttcccc
aactcttacgacacggccatggctgtgtgtaacagcatccagcatcctgtcacgaaagaa
aacctctatgagtttctggaccgctgtgccctgggagcccaaggacagaaccggaaacgc
ccctctgacccagacacggagctcatgccccctcccgctccaaagagacccaaccgggct
gcaccatag
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