Coregonus clupeaformis (lake whitefish): 121549033
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Entry
121549033 CDS
T08357
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121549033 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121549033 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121549033 (rars2)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121549033 (rars2)
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
121549033 (rars2)
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121549033 (rars2)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121549033 (rars2)
Prokaryotic type
Other AARSs
121549033 (rars2)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121549033 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
tRNA-synt_1g
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
121549033
NCBI-ProteinID:
XP_041716755
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All DBs
Position
33:33493369..33501399
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AA seq
580 aa
AA seq
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MHMACYFRRSIASKLSRALGRSEDAFISALCAIPVSKKQQSPDFRLSVNTLLRNGILPAN
GDLQAQTEALARQLKQDSVVEEIFAGRGVIHFRVSRTLLVQKVLEQLCQERDKFGVKSEL
FDGLKKGTTVVEFSSPNIAKKFHAGHLRSTIIGNFIANLKESLGNNVLRVNYLGDWGMQF
GLLGAGFQRFGCQEKLKKNPLQHLFDVYVQVNKEAENNEVIGQAAREFFRQLEQQEQQAL
LLWKQFREITVEEYQQVYKRLGVHFDIYSGESFHQQQAQEVVQRLQRLGLLKTTEKGTSV
VDLSSAGDMSSYSTVLRSDGTSLYITRDLAAAIDRKERYNFDEMIYVTDKSQGIHFQQLF
QILLAMGHSWAERCQHVPFGLVQGMKTRLGEVVFLEDILDEARARMLRNMSQSKTTKEMV
YPEDTAEKVGISALIVQDFKGPLGSDYKFDWDRILQAQGDTGVFLQYTHARLCSLIHQHG
DGEEGAFDPSLLIDQRSISILQHLLRYDEVLYQSAQDLQPKHLVNFLMTLSHLVASAHRE
LPVKGSPQAVAQARLRLFSGVCTVLANGMKILGITPVEKM
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggcttgttatttcagaagaagtattgcatcgaagctctctagggctttggga
cggtctgaagatgccttcatttctgctctctgtgctatcccagtctccaaaaaacagcaa
tcccctgatttccggttgtcagtcaacactctgctgaggaatgggatcctgccagctaat
ggagacctccaggcacagacagaggctctggccagacagttaaagcaagacagtgtggtg
gaagaaatatttgctggacggggagtgatacactttagagttagtcggactctgttagta
cagaaagttttagagcagttgtgccaagaacgtgacaaatttggtgtgaaaagtgaactt
ttcgatggcctcaaaaaaggaacaactgtggtggagtttagttctccaaatattgccaag
aagtttcatgctggacatctgcgttccaccattattggtaacttcattgccaacctgaaa
gaatccttgggaaataatgtattgagagtgaattacctgggagattggggcatgcagttt
ggtctgctgggagctggctttcagcgctttgggtgtcaggagaaattgaaaaagaatccc
ttacaacatctatttgatgtttacgttcaggtgaacaaggaggcggagaacaatgaggtc
ataggacaggcggccagagagttctttagacagctggaacagcaggaacagcaggccctg
ttactatggaaacagtttagagagatcacagtggaggagtaccaacaagtctacaagcgt
ttaggggttcactttgacatctactctggagagtcatttcaccaacaacaagcccaggag
gtggtacagcggctacagagactaggcctactaaaaaccacagagaaggggaccagcgtg
gtggatctctcttcagctggagacatgtccagctactccacagtactacgcagtgatggg
acatctctctatatcaccagagatcttgctgcagccatagatcgaaaggaaaggtacaat
ttcgatgagatgatctatgtgacagacaaaagtcaagggattcatttccagcagctgttc
cagatcctcttggctatgggacactcgtgggctgaaaggtgccagcatgtgccgtttggc
ctggtgcagggtatgaagacgaggctgggagaggtggttttcctggaagacattctggat
gaagcccgggctaggatgctcaggaacatgagccagtctaagaccaccaaggaaatggtg
tatccagaagacaccgctgagaaagtggggatcagcgcgctcatagttcaggactttaaa
gggcctctaggatcagactacaagtttgactgggacaggatcctccaggcccagggtgat
accggggtgttcctacagtacacacacgccaggctctgtagtttaatacatcagcatggc
gacggagaggaaggtgcctttgacccgtcacttcttatagatcagaggagtatttctata
ctccagcacttgcttcgctatgacgaagttctataccaatctgcacaggatctgcagcca
aaacatctcgtcaacttccttatgacactgagtcacctggttgcatcagcacacagggag
ctgccagtgaagggaagccctcaagctgtcgcacaggcaaggctgcggctcttcagtggt
gtctgcactgtgttggccaacgggatgaaaatattaggcatcacaccagtcgagaaaatg
tga
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