Coregonus clupeaformis (lake whitefish): 121549040
Help
Entry
121549040 CDS
T08357
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X1
KO
K05629
atrophin-1 interacting protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121549040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
121549040
NCBI-ProteinID:
XP_045065640
LinkDB
All DBs
Position
4
Genome browser
AA seq
1584 aa
AA seq
DB search
MSKSLKKKNHWTNKVHESVLCRNKEGELGFELKGGAENGQFPYLGEVRQDKVACQSGKLS
QDELLLEVNETPVAGLTIRDVHAVVRHSKDPVRLKCVKQGGVIDKDLRHYLNLRFQKASV
DHELQQIIRDNLYLRTVPCTTRQPKEGEVPGVDYNFVTVDRFMELEKSGALLESGTYEEN
YYGTPKPPCEPSPLLLNVTDQLLPGARPSSKGKRKRNKSVSNMEKAGIEPPEDEEEERPV
VNGNGNGITPESSEHEDKSTDVSSGDVPPQTCPSTETPTTPNNEGPQEEGGELAKSPPKP
DENESELGPLPDNWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKEDELPYGW
EKIDDPIYGSYYVDHINRRTQFENPVLEAKRRVQQHQQMQEQGLSSLPLPTIYREKPLFT
RDATQLKGSFLSTALQKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMDTGDVIV
YINDVCVLGTTHADVVKLFQSVPIGQSVTLVLCRGYQLPYDPEDPGASAGATTTLLSPLG
LMEQRPLLVNGRSNYDSYMDYISRTARFVQEHGDQHLNAHHHHQPPPPHTGDTHLDGSSL
TPAGPHGEDSVSMASSGATQTELLTLTMVKGAEGFGFTIADSPTGQRVKQVLEPQGCPGL
CEGDLIVDINQQGVQGLSHTQVVELLKECAVGAETSLVIQRGGGGHYSPWKTPKQVLEQW
DAAQGQGGGQGSPQTSLSAPVVPHNAPFLTRHLHRASVADSAFPEGFDLSRPDPYDLYEK
SRAIYESSRQPGMPRTTFSVDHSGAEYQEVEVHLRRQKSGFGFRILGGDEAGQPVSPDTR
EKILIGAIIEKSPADRDGRLRPGDELIFVDGIPVAGKPHRYVIDLMHGAARNGQVNLTIR
RRLQGPGEPCPENGRSPGSVSTQHSSPRSDFTNVTYPGNNAAPPTVAMGTGITTDGAPTS
NVQQPPSDVIIHRKESEGFGFVIISSLNRPETAAAISVPHKIGRIIDGSPADRCGKLKVG
DRILAVNSQSIINMPHADIVKLIKDAGLSVTLRIIPQEELSPSAPSSEKQSPVVTQQHSP
QAQPSPTVAQPSPAVTQPSPAVTQPSSLTHQSPITQTPAPPPQIYTHDSSYRSEVKARQD
VKPDIRQPPFTDYRQPPLDYRHPPVADYRQPPTLDYRHPPLMDYRQLSTDPRHFPMPVPH
DYRQIQPQMPQMPQVYQDFDFFTVELEKSMKGFGFSIRGGREYKMDLFVLRLAEDGPAIR
NGRMRVGDQIIEINGETTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDSTSPWDAR
PSASPSLSEVALPPDTLTMPSPSSHLTPPQQPPGPDLAHLPPPEVPWEPVAQESRRAERS
QSPRKAPAEPHNPDQTGHGRRDRDRPSGSGCSSRSAKQKEGGRSTRGGSGPKEGGLVGRD
EQLPGGGEAKSSSRGRSKERIAGESSSSMSHGKREPTQSPTKGSKPSYTNSNGNGGSGCG
TQSGSSSHPDISVGHQGEPAQEKPRPREAERGPGETRPCRPTKITSSGSTAAGRKATVSP
GPWKIPGSDKLPSTLHSGTSTVSR
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagcctgaagaagaaaaaccactggaccaacaaagtccacgagagtgtcctt
tgcaggaataaggaaggggagctcgggttcgagttgaagggaggcgcggagaatggacag
ttcccttatctcggggaggttaggcaagacaaggtggcctgccagagcggcaaactgtcc
caagatgaactactccttgaggtcaatgaaacgccagtggccggactaacaatcagggat
gtacatgcagtggtcagacacagcaaagaccctgtccgccttaagtgtgtcaaacaaggg
ggcgtcatagacaaggacctgcgccactacctcaacctgcgcttccagaaggcctcagtg
gaccacgagctccagcagatcatcagagacaacctctacctccgcaccgtaccctgtaca
accaggcagcccaaggaaggagaggtcccgggggtggactacaactttgtgactgttgac
cggtttatggaattggagaaaagtggagccttactagagagcggaacttatgaagagaac
tattacggcacccctaagcccccgtgcgagcccagccctctgctgctaaatgtaacagat
cagctcctgccgggcgcccgacccagctccaaggggaagaggaaacggaacaagtcggtc
agcaacatggagaaggccggcatcgagccacccgaggatgaggaggaagagaggcccgtt
gtcaatggcaacggcaatggcatcaccccagaatccagcgaacatgaagacaagagtaca
gatgtctcctcgggggatgtccccccccagacctgtccctccaccgagacccccaccacc
cctaacaacgaaggcccccaggaggaggggggcgagctagccaagtcaccccccaagcca
gatgagaatgagagtgagctaggccctctgccagacaactgggagatggcctacacagag
aagggagaggtgtactttatcgaccacaacaccaagacgacgtcgtggctggacccgcgg
ctggcgaagaaggcgaagccaccggaagaatgcaaagaggacgagctgccgtacggctgg
gagaagattgatgaccctatttacggcagctactatgtggaccacataaacagaaggacc
cagtttgagaacccagtcctggaagccaagaggagagtccagcaacaccagcaaatgcaa
gagcagggtctgtcctcgctgcccctacctactatctaccgagagaagcccctgttcaca
cgggacgccacccagctgaagggcagcttcctgtccacggccctgcagaagagcaacatg
ggctttggcttcaccatcatcggaggggacgagccagatgagttcctgcaggtcaagagt
gtcatacctgacggccccgctgcacaggacggaaagatggacacaggtgatgtcatcgtg
tacatcaatgacgtgtgtgtcctgggcaccacccatgccgacgtggtcaagctgttccag
tcagtgcccatcgggcagagcgtaaccctggtgctgtgccgtggctaccagctgccctat
gaccccgaggatccgggcgccagcgccggcgccaccaccaccctcctctccccactgggc
ctgatggagcagcgccccctcctggtcaacggacgctcgaactacgacagctacatggac
tacatctcgcgcacggcgcgctttgtccaggaacacggtgaccagcatctcaatgcccac
caccaccatcaacccccaccgccgcacaccggcgacacccacctggatggctcctccctg
acacccgccgggccacacggcgaggactcggtgtccatggcatcatcgggggcgacgcag
acggagctgctgacgctgaccatggtgaagggggcggaggggtttgggttcaccatcgca
gacagcccgacgggccagagggtgaagcaggtgctggagccccagggctgtcctggtctg
tgtgagggggacctgatcgtagacatcaaccagcagggagtgcagggcctcagtcacacc
caggtggtggagctgctcaaggagtgtgccgtcggggctgagaccagcctggtcatccag
aggggtggaggaggtcactattcaccctggaagacccctaaacaggtgttggagcagtgg
gacgcggcccaaggccagggagggggtcagggcagcccccagaccagtctgtctgccccc
gttgtcccccacaacgcccccttcctgacccgccacctccacagggcctcagtcgcagac
tctgccttccccgagggctttgatctgagcaggcccgacccctatgacctctatgagaag
tccagggctatctatgagagtagtaggcagccaggcatgccgcggaccaccttctctgtg
gaccactcaggggcagagtaccaggaggtggaggtccacctgaggaggcaaaagtccggc
ttcggcttccgcatcctggggggagacgaggcgggacagcctgtgagtccggacacccgt
gagaagatcctgattggggccatcatagagaagagcccggcggacagagacgggcgcctg
cggccgggcgatgagctcattttcgtggacgggatcccagtggcggggaagccccaccgc
tatgtcatcgacctgatgcacggcgccgcccgcaacggacaggtcaacctcaccatcagg
aggaggctacagggcccaggagagccctgtccagagaacggccgcagccccggctccgtg
tccacccagcacagctccccacgcagcgacttcaccaatgtcacgtatcctggcaacaac
gcagccccacccactgtcgccatgggtacaggtatcaccacagacggggcgccgacctcc
aacgtgcagcagccacctagtgatgtcattatccaccgcaaggagagtgaagggtttgga
ttcgtcatcatcagctcgctcaaccggcccgagaccgcagccgccatcagcgtgccccat
aagattgggcgtatcatcgacggcagcccggcggaccgctgtggcaaactgaaggttggt
gaccgcatcctggcggtgaacagccagtccatcatcaacatgccccacgccgacatcgtc
aagctcatcaaggacgccggcctcagcgtcaccctccggatcataccacaggaagagctg
agcccgtcagcccctagctcagagaagcagagcccagtagtgacccaacaacacagtccc
caagcccagcccagtcccaccgtggcccagcccagccctgctgtcacccagcccagccct
gcagtcacccagcccagctccctgacccaccagagccccatcacccagaccccagccccc
ccaccccagatctacacccacgacagcagttacaggtcagaggtgaaagcgaggcaggac
gtgaaaccggacatccgacagcctccattcacagactacagacagcccccgttggactac
agacaccctcctgtagcagactaccgccagcctcccaccctggactacagacaccctcct
ctgatggactacagacagctgtccactgaccccaggcacttccccatgcctgtgccccac
gactacagacagatccagccacagatgccacagatgccacaggtctaccaggactttgac
ttcttcaccgtggagctggagaagagtatgaaggggtttggcttcagtatccgtggaggg
agggagtacaagatggacctgtttgtcctgcgactggccgaggacggacccgccatccgc
aacgggaggatgagggtaggggaccagatcattgagatcaacggggagaccaccagggac
atgacccacgcccgggccatcgagctcatcaagtcagggggccggcgggtgcgtctgctc
ctgaagagaggcacagggcaggtcccagagtatgacagtacctccccctgggatgcacgc
ccttcagcctccccaagtctgtcggaagtagccctgcccccagacactctgaccatgcca
tcaccctcatctcatctgacaccgccccagcagcccccaggccccgacctggctcacctg
ccacctccggaggtcccgtgggagccggtggcacaagagagcaggagggcggagcgctcc
cagagcccccggaaggccccggccgagccgcataatccggaccagaccggccacgggagg
agggaccgggaccggcccagtgggagtggctgcagtagcaggagtgccaagcagaaagag
ggtggcaggtccacccgcggagggagtggccccaaagagggagggcttgtggggagggat
gagcagctacctgggggaggggaggccaaaagctcctccagggggaggtctaaggagagg
atagccggggagagcagtagcagcatgtcccacgggaaaagagaacccacccagtccccg
acaaaaggctccaagccctcatacacaaactctaacgggaacggcggcagcggctgtggt
actcagagcggcagcagcagtcacccagacattagtgtcgggcatcagggggagccagcg
caggagaagcccaggcccagagaggcagagaggggccctggagagacccggccctgccgc
cccaccaagatcaccagcagcggcagcacggcagcgggtaggaaggccaccgtgtcccct
gggccctggaagatcccaggctctgacaagctgcccagcaccctgcactcgggcacgtcc
actgtgagcagataa
DBGET
integrated database retrieval system
