Coregonus clupeaformis (lake whitefish): 121549056
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Entry
121549056 CDS
T08357
Name
(RefSeq) paired box protein Pax-1-like
KO
K09382
paired box protein 1/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121549056
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121549056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
Actino_peptide
Motif
Other DBs
NCBI-GeneID:
121549056
NCBI-ProteinID:
XP_041716806
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All DBs
Position
33:34884106..34889534
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AA seq
354 aa
AA seq
DB search
MDQTYGEVNQLGGVFVNGRPLPNSIRIRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADAVCDKYNVPSV
SSISRILRNKIGNLSQPGQYENSKPTPPQLSYNHMYPYSYPSAMSPTGTKIGSGPGIPVT
PGHVSLSRHGWPSVHTVSNILGIRAFMDPAAIAGAEGYPSKMEEWASVNRATFSSAHGVN
GIEKSSLEADIKFPQSSSNLSSYVPACAYSPPNQYGVYGGPAGNYMTTGHHWQSQSTSLA
HPNSEATMQGGDLHMAMSFKHSAREGDRKPPSPLSKPQHEALSVHGLSLRTSAS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacatatggagaagtaaaccagcttggcggggtatttgtcaacggacgacca
cttccaaattcgattcggattagaatcgtggaattagctcaacttggaatacgaccgtgt
gacatcagtagacagcttcgagtctctcatggctgtgtgagcaagatactagcgagatac
aacgagacgggttcgatactgccaggtgccataggaggaagtaaaccccgggttacaaca
cccaacgtggtgaaaagcataagggattacaaacaaggagaccctggaatatttgcttgg
gagatcagggacaggcttcttgcagatgcagtgtgtgataagtataacgttccctccgtt
agctccataagccgcattttacgcaacaaaataggaaatctttcccagcctggccagtat
gagaacagcaagccaacccctcctcagctctcctacaaccacatgtacccgtactcatac
cccagcgcaatgtcacccactgggactaaaattggcagcggtcccggtatacccgtcacg
ccgggccatgtcagcctctcccgccatggctggccttccgtgcacacagtcagcaacatt
ttgggcatccgtgccttcatggaccctgcagccattgctggagctgaggggtacccatca
aaaatggaggagtgggcgagcgtaaacagagcgacgttttcctctgcccatggtgtcaac
ggaatagagaaatcctccctagaggcagacatcaagtttcctcagtcttcttcaaaccta
tctagttatgtccctgcttgtgcctactctcccccaaaccaatacggggtgtatggtgga
ccagcaggtaactatatgacaactggacaccactggcagtctcagagcacgagcctggcc
caccccaacagcgaagcaacgatgcaaggtggagacctccacatggcaatgtccttcaaa
cactcagcacgagaaggagacagaaaacctcccagtcccttgagcaagccccagcacgag
gcgttgagcgtacacggactatctctccggacctcagcttcatag
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