KEGG   Coregonus clupeaformis (lake whitefish): 121549097
Entry
121549097         CDS       T08357                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015  mRNA surveillance pathway
cclu04110  Cell cycle
cclu04114  Oocyte meiosis
cclu04261  Adrenergic signaling in cardiomyocytes
cclu04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121549097
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121549097
   04114 Oocyte meiosis
    121549097
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    121549097
  09158 Development and regeneration
   04382 Cornified envelope formation
    121549097
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121549097
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121549097
   03036 Chromosome and associated proteins [BR:cclu03036]
    121549097
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     121549097
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     121549097
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     121549097
SSDB
Motif
Pfam: B56 Sec7-like_HUS
Other DBs
NCBI-GeneID: 121549097
NCBI-ProteinID: XP_041716864
LinkDB
Position
33:37188677..37300397
AA seq 513 aa
MSAISATEKVDGFTRKSMRKAQKQKKSQGSSQFRTQTLTELSPLPQLKDAPSTEQQELFT
QKLQQCCMLFDFMDSVTDLKSKEIKRATLNELVDYVSTNRGVLVETAYPEISNMICTNIL
RTLPPSDNPDFDPEEDEPTLEASWPHIQLVYEFLLRFLENPDFQPSIAKRYIDQKFVLQL
LELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETDHFNGVAELLEI
LGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDPTLTEPVIQ
GLLKFWPKTCSQKEVMYLGEIEEILDVIEPTQFKKIEEPLFKQISRCVANAHFQVAERAL
YFWNNEYILSLIEENIDKILPIMFGSLYRISKEHWNPTIVALVYNVLKTLMEMNSTLFDE
LTASYKSDRQREKKKEQEREELWKKLDELKLSDAAALVQNNSHGLQNAAQNNNNNNNNHH
DNQEKSTAVAADHEDPVVAMDTTESVEVLTSAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcggctatctctgcgactgagaaagtggacgggttcacgcgaaaatcaatgaggaaa
gcccagaaacagaagaaatctcaagggtcgtcccagttccgaactcaaacccttaccgag
ctttcccccttgccgcagctcaaagatgcgccctccacggagcagcaggagctgttcacc
cagaaactccagcagtgctgcatgttgtttgacttcatggactcggtcaccgacctgaag
agcaaggagatcaagcgggccacgctcaacgagctggtggactacgtctccaccaacagg
ggcgtcctggtagagactgcctatccggagatctctaatatgatctgcaccaacattttg
cggactcttccaccgagtgacaaccccgattttgacccagaggaggacgagcccactcta
gaggcctcatggccacacatacagcttgtctatgagttccttctgcgattcttggagaac
ccagactttcagcccagcatcgccaagcgttacattgatcagaagttcgtgctgcagctc
ctggaactgtttgacagcgaggacccccgggagagggacttcctgaagactgtcctgcat
cggatctacgggaagttcctggggttgcgggctttcatcaggaagcagatcaacaacatc
ttcttgcggttcatctacgagaccgatcacttcaatggagtggccgagctcctggagata
ctggggagcatcatcaatggctttgcactgccgttgaaggcggaacacaagcagttcctg
atgaaggtgctcatccccatgcacaccgccaaaggactggccctgttccacgcacagctg
gcctactgtgttgtccagttcctggagaaggaccccaccctcaccgaaccggtgattcag
gggctgttgaagttttggcccaaaacctgtagccagaaggaggtgatgtacctgggggaa
atcgaggagatcctggatgtcattgagcccacccagttcaagaagattgaagagcccctt
ttcaagcagatctccagatgtgtggccaacgcccacttccaggtagcagagcgagccctc
tacttctggaacaatgagtatatcctgagcctcattgaggagaacatcgacaagattctg
ccaatcatgtttggtagcctgtacagaatctccaaagaacactggaacccgacgattgta
gctctggtctacaatgtgctgaagaccctgatggaaatgaacagcacgctatttgatgag
ctgacagcctcttacaaatcagacagacagcgggagaagaagaaggagcaggagagggag
gagctgtggaaaaagctggatgagttgaagctgagcgatgctgcagcactggtgcagaac
aacagccacgggctccagaacgctgcccaaaacaacaacaacaacaacaacaatcaccac
gacaaccaggagaagagcaccgctgtcgctgctgaccatgaagaccctgtagtcgccatg
gataccacggagagtgttgaggtcctcacaagtgccaaatga

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