Coregonus clupeaformis (lake whitefish): 121549187
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Entry
121549187 CDS
T08357
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121549187
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121549187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
121549187
NCBI-ProteinID:
XP_041716981
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All DBs
Position
33:complement(38124312..38132389)
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AA seq
466 aa
AA seq
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MDDLESELRVPGEELGENESSDDDESINRKRIKKPNLPLAPPIFKETPRETGFHKTTRNC
LQHIREVLLHHRWQDAAEYMASYSQTLEDTTANMPQLYAEIIWRIGTEILHHHPESKLED
YNSFYERVKHSGVKHYLKVCLEHSFHLLVNGQFEDAKRQLSIAESWRYGKQSAGQSQRIK
LIQAYSGFLDYFIWSDKKATVSSTDEYDAAVNQEMHSYFRQSSVNLKEIMKLPGVWDPFV
LSYIDMLEFYNDHEGAVTVLNDYAYDNSFPPNPNAHVYLYRYMKKHNQPLKKLLKVLKIL
HTLVPSHEMMPEYCSLLLQSEKEGDLQKALGVVLDLLDYSSWRSSLDVWNHLRNIIKRLR
MKKQWRKSFAEEMANRKDWWLAIHFSTFQARKDLAENRELLEVKSFVVEAFCPRYTSMYH
RVGKEARKGVTSEAQKAKRAKKRIRNPRQLRNIRRLRRESGQQSQD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctggagtcggaactcagggtacctggagaagaactgggcgaaaatgagtct
tcagatgatgatgaatcaatcaacagaaaacgaatcaagaagccaaacctacccctggcg
cctcctatatttaaagagacaccccgtgagactggctttcacaagaccacaaggaactgc
ctccaacacatcagggaggtcttgctgcaccatagatggcaggatgccgcagagtacatg
gccagttactcacagacactggaggataccactgcaaacatgccacaactctacgctgag
ataatttggaggataggcacagagatactacaccaccatcccgaatcgaagctggaagac
tacaacagcttctatgagcgagtgaaacactcaggagtaaagcattacctgaaggtctgt
ctggagcactcgttccacctcctggtcaacgggcagtttgaggatgccaagcgtcagctg
tccatcgctgagagctggaggtacggcaagcagtcagccggtcagtcccagaggattaag
ctgatccaggcctacagtggcttcctggattacttcatctggagtgacaagaaagccact
gtatccagcacagatgagtatgatgcagcagttaaccaagaaatgcatagctacttccga
caatcctctgtgaacctgaaggagatcatgaagcttcctggcgtctgggatccttttgtt
ctgagttacattgatatgctggaattctacaacgatcacgagggagctgtgacggttctg
aatgactatgcctatgacaacagtttcccccccaaccccaatgcccatgtctacctatac
cggtacatgaagaaacacaaccaaccattgaagaaacttctcaaagtgctgaagatcctg
catacattggtcccaagtcatgagatgatgccggaatactgttctcttctgctacaatcg
gagaaagagggtgatcttcagaaggctctaggtgtggttctggatctcctggactactcc
agttggaggagcagcttggatgtctggaaccatttgaggaacatcatcaagagactgagg
atgaaaaaacaatggcggaagagttttgcagaggagatggcgaacagaaaggactggtgg
ctagcaatacacttctcaacattccaggccaggaaagatttggcagagaatagagagcta
ctggaagtgaagagctttgtggttgaagccttttgtcctcgctatacttccatgtaccac
cgtgttggtaaggaagcccgaaaaggagtaacttctgaggctcagaaggctaagagggca
aagaaaaggataaggaatcctagacagctaagaaatataagaaggctcagaagagaaagt
ggacaacaaagccaagactga
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