Coregonus clupeaformis (lake whitefish): 121549297
Help
Entry
121549297 CDS
T08357
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121549297
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
121549297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
121549297
NCBI-ProteinID:
XP_041717093
LinkDB
All DBs
Position
33:complement(32117063..32130028)
Genome browser
AA seq
603 aa
AA seq
DB search
MDQQHGKVERFLKLGYSHSDIVRVLESLHHDAQTNDILEELIKTCHTTTTTNPSTSASRS
AYSRIQLIPRGCSSPQPSQPLRPSSAPDRDPTGGFRTVVIDGSNVAMSHGNKQVFSCRGL
LLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTDQHILHELEKRTILVYTPSRCVNGKR
VVCYDDRYIIKLAYESDGIVVSNDNYRDLQIEKPEWKKFIEERLLMYSFANDKFMPPDDP
LGRNGPTIDNFLRKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELRAK
RKPTAQTDREQSFLPSGPSPALIQGVSQEAHPYTSPYEPDLTTTHLYRYLSTPPPLIKED
HSHRASPSDQFTSQRETGSPALHHKSSLRLCPSPDTDEAFSSLEASLSRLYNQDQTNNTK
GLVVSYTYSSGVASCSQGSGDFYPSSTSSSHSHASNQQRLSHNAPQKLPLCGCDDSQSCE
CSQCMYSHQHLQPQRGECSYAVHSNHIHFTEQQYFQSPPPQRQSHSLPEHSLEQGLSGER
VGMTRSNGGKAPDSEQRKSVKNQLSTLFPPSIVDYVMSLYPYTLNMSELVPLIQRFRISH
IPF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccacagtgac
attgtgcgcgtgctggagagcctgcaccatgacgcccagaccaacgacatactggaggag
ctcatcaagacctgccataccaccactaccaccaacccatccacatcagccagccgctca
gcctactccaggatacagctgatccccagaggctgcagctctccccagcccagccagccc
ctgcggcccagctcagctccagacagggatcccactgggggattcagaacggtggtcatt
gatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgggggctg
ctgttggcagtcaggtggtttctggagaggggtcttcgtgacatcaccgtgttcgtgccc
ctgtggaggaaggagcaacccagtcccgaggcacccatgacagatcagcacatcctccat
gagctggagaagaggacgatcctggtgtacaccccgtcacgctgcgtcaacgggaagaga
gtggtgtgctatgacgaccgctacatcatcaaactggcctacgagtccgatggcatcgtt
gtgtccaatgacaactacagagacctgcagatagagaagccagagtggaagaagttcata
gaggaaaggctgttgatgtacagctttgcaaatgacaagttcatgcctccagatgatcct
ctgggaaggaatggcccaacgattgacaactttctgaggaaaaagcagtggaccccagaa
aacaagcagcagcattgcccatatggaaagaagtgtacttacggagtgaagtgcaagttc
taccacccagagcgctccaaccaatcacaactgtctgtggcagacgagctgagagccaag
agaaaacctactgctcaaacagacagggagcagtcatttctcccctcaggccccagtcct
gctctgatccagggagtcagccaggaggcccacccttacacatccccttatgagccggat
ctaactactactcatctatacagatatctatccacaccgcctccccttataaaagaggac
cattcccatagggcttcgcctagcgatcagttcaccagccagagagaaacaggcagccca
gctctacaccacaagtccagcctccgcctctgccccagcccagacactgacgaggccttc
agctccctggaagcctccctgtccagactctataaccaggaccagaccaacaacaccaag
gggctggtggtgtcctacacctacagcagtggggtggccagctgcagccagggcagtgga
gacttctacccttccagcacttccagcagccacagccacgccagcaaccaacagaggctc
agccacaatgccccccaaaaactgccactgtgtggctgtgacgactcacaaagctgtgag
tgtagccagtgcatgtacagccaccagcatctccagccacagcgaggagagtgctcctat
gctgttcacagtaaccatatccatttcacagagcagcagtatttccagagtcctcctcca
caaaggcagagtcacagcctcccagaacacagcctggaacagggcctctctggtgagaga
gtggggatgaccaggtccaatggaggtaaagctccagatagtgagcagaggaagagtgtg
aagaaccagctcagcaccctcttcccccccagcatagtagactatgtgatgagtctgtac
ccatacaccctcaacatgtcagagctagtgcctctgattcagaggttcagaatcagccac
attcccttctaa
DBGET
integrated database retrieval system
