KEGG   Coregonus clupeaformis (lake whitefish): 121549325
Entry
121549325         CDS       T08357                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121549325
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121549325
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR41 ASA1 Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_SCAP CFAP251_N WDR54 TAF1C_beta-prop MIOS_WD40
Other DBs
NCBI-GeneID: 121549325
NCBI-ProteinID: XP_041717120
LinkDB
Position
33
AA seq 674 aa
MLFRSIVDRGVRKQRRNDLSPKYPLSSLLDGYQCTRHDEHLSYGNLGVAVPPFGCAFSTA
RGLQSVLAVANEEGVLRLYNTENRHSPVLKEWMAHENAVFDLAWVPGEASLVTASGDQMA
KLWDVTSEELLGSFKGHQCSLKSVAFTQQDKAVFCTGGRDGNIMVWDTRCSKKDGFYRQV
KQISGAHNKTDRNTPSNPKKRRPGTRGMAPSVDSQQSVTVVLFRDEHTLISSGAVDGIIK
MWDLRKNYTAYHHDPIPLQAYPYPGSSTRKLGYSGLVLDSTGSNLFSNCIDDNIYMFNVS
GLKTTPVAVFGGHLNSSFYVKSTVSPDDQFLASGSSDHHTYIWKISDPKQAPMMLQGHNQ
EVTSIAWCPTDFTKIASCSDDNTVRIWRLDRGTDGAKSSVGEANLVGWACPKPATTVSSP
RPLNQAECTPAKSPRAGSLGALSSPQPAACAPSGADLPLPSSTSAASPLQAQGAKATLIR
QKTPSSIRNWFARSPGEQVTSPLHKVLSPQSPAGTPPLERGAKRRLETGDCGAAGGCEGA
GQCDCVTELYPAAKKSRGLAGLCCPFQEPPQAGTEKSEAWGGAGLQVEDQMPVPSTQANK
ENCSPGGADWLSVMSQRLRKGVGNPSSTPRSPSSCKGQDGRMPTSPAMRSSSQAMRSPRS
MQKISSYFQQKPPE
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgctttttcgctctattgttgacagaggagtccgtaaacagaggcgcaatgacctcagc
ccaaagtacccgttgtcctctctgctggacggctaccagtgtacacggcatgatgaacac
ctctcatacgggaacctgggggtagccgtgcccccttttggatgcgccttctctacagcc
cgagggctgcagagtgtacttgcggtggccaacgaggagggtgtcttgaggctctacaac
acagagaaccgacatagtccagttctgaaagaatggatggcacatgagaatgctgtattt
gaccttgcttgggtgccaggggaggctagcttggtgactgcgtcaggtgatcagatggcc
aagctgtgggacgtgacatcggaggaactccttggcagcttcaaggggcaccagtgcagc
ctcaagtctgttgcattcacacagcaggataaagctgtgttctgtactgggggccgagat
gggaatattatggtctgggacaccaggtgcagcaaaaaagatggcttctacaggcaggtg
aagcagatcagtggggctcacaataagacggacagaaacacaccctctaaccctaagaag
agacgcccgggcacacgcggcatggccccgtctgtggactcccagcagagtgtcaccgtg
gtgctattccgtgatgaacacaccctcatctcgtcaggagctgttgatgggataatcaag
atgtgggaccttcggaaaaactacactgcataccaccacgaccccatacccctccaggca
tacccgtacccaggctccagcacacggaagctaggttactcggggctggtgttagactcc
acgggctccaacctgttctccaactgcatcgacgacaacatctacatgttcaacgtcagc
ggactgaaaaccactccagtggcagtctttggtggtcacctcaactcctcgttttacgtg
aagtccactgttagcccagacgaccagttcctggctagtggctcaagtgaccatcataca
tacatctggaagatctccgacccaaagcaggctcctatgatgcttcagggccataaccag
gaagtgacctccatagcgtggtgccccacagatttcacaaagattgcttcctgctctgac
gacaacaccgtacggatctggcgtctggaccggggcacggatggagcaaagtcctctgtc
ggagaggccaatctggtgggctgggcgtgtcctaaacctgccaccaccgtgtcgagtcca
aggcctttgaaccaggcggagtgcaccccagccaagagtccccgggcagggagtctgggg
gccctgtcctccccccagcctgccgcctgcgcccccagtggagccgacctgcctctaccc
tccagcacctccgccgcctccccccttcaggcccagggtgccaaggccaccctcatacgc
cagaaaacaccctcctccatcaggaactggtttgcccggtctcctggggaacaggtcacc
tctcctctccacaaggtactcagcccccagagcccagccggtacccctcccttggagagg
ggggccaagcgccgactggagacgggtgactgtggggcagcagggggctgcgaaggtgcg
gggcagtgcgactgcgtcacagagctctaccccgcagccaagaagagccggggactggca
ggcctgtgctgccccttccaggagccacctcaggcgggcacagagaagagtgaggcctgg
ggaggagcgggcctacaggtggaggaccagatgcctgtcccatccacacaggcaaacaag
gagaactgctctccaggtggggcagactggttgtctgtgatgagccagaggctgaggaaa
ggtgtgggaaaccccagcagcactcccagaagtcccagttcctgcaaggggcaagatggc
aggatgccaacctcaccggcaatgcgctcttcctcccaagcaatgcgttcaccacgatcc
atgcagaaaatctcctcctacttccagcaaaagcctccggagtga

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