Coregonus clupeaformis (lake whitefish): 121549472
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Entry
121549472 CDS
T08357
Symbol
pdx1
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121549472 (pdx1)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121549472 (pdx1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121549472
NCBI-ProteinID:
XP_041717205
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Position
34:13638794..13642641
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AA seq
273 aa
AA seq
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MNREEHYYSPAQLFKDSCAYQRPHSEDFSHSPPPCLYMGRQAQSVCSSPSIGGLDQTSLP
DIAPYSMPMREDPGVPQLHHPQAPQQTLQPGGYGDPGEQALCADRNRYHLPFPWMKSTKS
HVQTWKGQWAGHYMEAEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAITLSLTE
RHIKIWFQNRRMKWKKEEDKKRVRGVNPEQDSSITSGDLKDEAGLGGGGAGLGVGGTGMG
VGGAGTPTPVPLITTTPPSPLHSHSLSGSRDSA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagaagagcactactattccccggcgcagctgttcaaagactcctgcgcctac
cagagaccccacagcgaggacttcagccacagccctccgccctgcctctacatgggccgg
caggctcagtccgtctgctcatcgccttccatcggagggctagaccagacgagtctccct
gacattgctccgtacagtatgcccatgcgagaggacccaggtgtgccgcagctccaccac
ccccaggcgccccagcagactctccaaccggggggttacggagacccgggggagcaggct
ctgtgtgcggataggaacagataccacctgcctttcccctggatgaaaagcaccaagtct
cacgtgcaaacctggaagggacagtgggcaggccactacatggaggcagaggagaacaag
cggacaaggactgcctacacgcgagcccagctcctggagctggagaaggagttcctgttc
aacaagtacattagcaggccgcgacgtgtagagctggccatcaccctcagcctcacagag
agacacatcaagatctggttccagaaccgacggatgaagtggaagaaggaggaggacaag
aagagggtgaggggggtcaaccccgagcaggactcgtccattacgtcaggagacctgaag
gatgaggcagggttggggggcgggggggctgggctgggggtcggggggacagggatgggg
gtcgggggggcagggactcccacaccggtacctctcatcaccaccacacccccctcgccc
ctacactcccactccctgtcaggttctagagactcagcctag
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