KEGG   Coregonus clupeaformis (lake whitefish): 121549528
Entry
121549528         CDS       T08357                                 
Name
(RefSeq) cadherin-20-like
  KO
K06807  cadherin 20, type 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121549528
Cell adhesion molecules [BR:cclu04515]
 Cadherins
  Major cadherins
   121549528
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 121549528
NCBI-ProteinID: XP_041717256
LinkDB
Position
34:27708399..27736008
AA seq 806 aa
MGDRHHHHIGVGRPVYTLLLSIALAWLALLSEVQGRMDRARTEEESGAGLLMRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLADGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYLLRAQAWNRQTDRPLEPESEFIVKIQDINDNEPKFLDGPYQATIPEMSTIGTE
VIRMTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVVRVSLAGMDREVRENYSVIIQ
AKDMGGQLGGLTGTTAVNITLSDVNDNPPMFDQKLYQMSVPESALVGSVVGRIRAKDRDI
GINAEMRYSIIDGDGRDTFDINTDPTNLFGIITIKKPLNFESKASYTLKIEGANIHLDHR
FLDKGPFSHVTIVHVSVEDVDEPPEFGSAAYYIEVPEDAEISKVFMTVSARDPDAANTSI
RYSIERTTDLGKYFYIDITSGALMTVLPLDREEISWHNITVLAMEMNNPRMIGSVSVAVK
ILDVNDNPPSLTQYFEAFVCERANAGQLIQTVTAVDPDDPLGGHHFYYSLAPEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDGEQPVQTSTSTLTIRVCSCDVDGNV
MSCNAEAYHLPASLSRGALIAILACIFVLLVMILLMLSLRSHRKKPYLHDEEDNIHENIV
RYDDEGGGEEDTEAFDIAAMWNPREAHLVGKQRQDMLPEIESLSRYVPLASVGGPGSGCG
DGNSNVQGYVLSKLLEADLNPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSSTDHEYDY
LNDWGPRFKKLAEMYGALETNNPPMW
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgggagatcgacatcaccaccatattggggttggtaggcctgtctacaccctcctactc
agcatagctctggcctggctggccctgttgtctgaggtccagggccgtatggatagagcc
aggacagaggaggagagtggagcagggctgctgatgagggtgaagagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctgtacataggaaagctc
cactcagacatggacctagcagacggctccatcaagtacatcctgtcaggcgacggtgcg
ggcaccaccttcaccatcgacgacagtacaggcgacatccatgctatcaagaggctggac
cgcgaggtcaaggcccagtacctgctgcgagcccaggcctggaaccgacagacagaccga
ccgctggagcctgagtctgagtttatcgtcaaaatccaggacatcaatgataacgaacct
aagttcctggatgggccctaccaggccaccatacctgagatgtcaaccattggcacagag
gtgattcggatgacagccacagatgcagatgaccctacgtatggtaacagtgccagggtg
gtctacagcatcctacaaggacagccatacttctctgtagagcccaagactggcgtggtg
cgtgtgtctctggcaggcatggaccgcgaggtcagggagaactactccgtcatcatccag
gccaaggacatgggtggccagctagggggtctgaccggaaccacagcggtcaacatcacc
ctcagtgacgtcaacgataacccacccatgtttgatcagaagctgtaccagatgagtgtt
ccagagtcggctctggtggggtctgttgtgggtcgaatccgggcgaaggaccgtgacatt
ggcatcaatgcagagatgaggtacagcataatcgacggagacgggagggacaccttcgac
atcaacacagaccccaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagagcaaggcaagctacactctgaagatagaaggagccaacatacaccttgaccaccgt
ttcctggataagggcccattcagccatgtcaccatcgttcacgtcagcgtagaggatgtg
gacgaacccccagagtttggctcggctgcctactacatagaggtccctgaggacgcagag
atcagcaaagtgtttatgacggtctccgctagagaccccgatgctgccaacacctccatc
aggtattccatagagaggaccactgacctggggaaatacttctacattgacatcacttcc
ggggcgttgatgacagtgcttcctttggacagagaggagatctcctggcataacatcacc
gtcctggccatggagatgaataaccccaggatgatcgggagtgtgtctgtagccgtgaag
attctggatgtgaatgataaccctccatcgctgacacagtactttgaagcctttgtctgt
gagcgcgcaaatgctggacagctgattcagacagtgacggcagtagacccagatgatcct
ctgggaggtcatcacttctactacagcctggccccagaggcagcaaacaaccccaacttc
acccttagagacaaccaagacaacacagcatggatcctgacgcgtcgtgggggctggtct
cagcaggatcagtcagtctactaccttcctatcttcatctcagatggagagcagccggtc
cagaccagcaccagcaccctgaccatccgtgtgtgtagctgtgatgtggacggcaacgtt
atgtcctgtaatgctgaggcctaccacctcccggctagtctgagcagaggggcgctcatc
gccatactggcatgtatcttcgtcctgctcgtgatgatcctgctcatgttgtccctccgg
agccaccgtaagaagccctacctgcacgatgaggaagacaacatccacgagaacattgtc
cgctacgatgacgaggggggcggagaggaggacaccgaggccttcgacatcgctgccatg
tggaacccccgcgaggcccacctagtggggaagcaacgtcaggacatgctgcctgagatt
gagagcctgtcgcgctacgttcccctggcatcagtgggagggccgggtagcggttgtggt
gatggaaacagcaacgttcaggggtatgtgctatctaagctcctggaggcggatctgaac
ccctgcgccccgccttacgactccctgcagacatacgcctacgagggggagggatcggtg
gccgagtccctgagctcgctgcagtctgggtgctccagtactgatcatgagtacgactat
ctcaatgactgggggcccagatttaagaaactggcagagatgtacggggctctagagacg
aacaaccctcccatgtggtag

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