Coregonus clupeaformis (lake whitefish): 121549528
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Entry
121549528 CDS
T08357
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121549528
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121549528
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
121549528
NCBI-ProteinID:
XP_041717256
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Position
34:27708399..27736008
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AA seq
806 aa
AA seq
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MGDRHHHHIGVGRPVYTLLLSIALAWLALLSEVQGRMDRARTEEESGAGLLMRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLADGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYLLRAQAWNRQTDRPLEPESEFIVKIQDINDNEPKFLDGPYQATIPEMSTIGTE
VIRMTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVVRVSLAGMDREVRENYSVIIQ
AKDMGGQLGGLTGTTAVNITLSDVNDNPPMFDQKLYQMSVPESALVGSVVGRIRAKDRDI
GINAEMRYSIIDGDGRDTFDINTDPTNLFGIITIKKPLNFESKASYTLKIEGANIHLDHR
FLDKGPFSHVTIVHVSVEDVDEPPEFGSAAYYIEVPEDAEISKVFMTVSARDPDAANTSI
RYSIERTTDLGKYFYIDITSGALMTVLPLDREEISWHNITVLAMEMNNPRMIGSVSVAVK
ILDVNDNPPSLTQYFEAFVCERANAGQLIQTVTAVDPDDPLGGHHFYYSLAPEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDGEQPVQTSTSTLTIRVCSCDVDGNV
MSCNAEAYHLPASLSRGALIAILACIFVLLVMILLMLSLRSHRKKPYLHDEEDNIHENIV
RYDDEGGGEEDTEAFDIAAMWNPREAHLVGKQRQDMLPEIESLSRYVPLASVGGPGSGCG
DGNSNVQGYVLSKLLEADLNPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSSTDHEYDY
LNDWGPRFKKLAEMYGALETNNPPMW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcgacatcaccaccatattggggttggtaggcctgtctacaccctcctactc
agcatagctctggcctggctggccctgttgtctgaggtccagggccgtatggatagagcc
aggacagaggaggagagtggagcagggctgctgatgagggtgaagagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctgtacataggaaagctc
cactcagacatggacctagcagacggctccatcaagtacatcctgtcaggcgacggtgcg
ggcaccaccttcaccatcgacgacagtacaggcgacatccatgctatcaagaggctggac
cgcgaggtcaaggcccagtacctgctgcgagcccaggcctggaaccgacagacagaccga
ccgctggagcctgagtctgagtttatcgtcaaaatccaggacatcaatgataacgaacct
aagttcctggatgggccctaccaggccaccatacctgagatgtcaaccattggcacagag
gtgattcggatgacagccacagatgcagatgaccctacgtatggtaacagtgccagggtg
gtctacagcatcctacaaggacagccatacttctctgtagagcccaagactggcgtggtg
cgtgtgtctctggcaggcatggaccgcgaggtcagggagaactactccgtcatcatccag
gccaaggacatgggtggccagctagggggtctgaccggaaccacagcggtcaacatcacc
ctcagtgacgtcaacgataacccacccatgtttgatcagaagctgtaccagatgagtgtt
ccagagtcggctctggtggggtctgttgtgggtcgaatccgggcgaaggaccgtgacatt
ggcatcaatgcagagatgaggtacagcataatcgacggagacgggagggacaccttcgac
atcaacacagaccccaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagagcaaggcaagctacactctgaagatagaaggagccaacatacaccttgaccaccgt
ttcctggataagggcccattcagccatgtcaccatcgttcacgtcagcgtagaggatgtg
gacgaacccccagagtttggctcggctgcctactacatagaggtccctgaggacgcagag
atcagcaaagtgtttatgacggtctccgctagagaccccgatgctgccaacacctccatc
aggtattccatagagaggaccactgacctggggaaatacttctacattgacatcacttcc
ggggcgttgatgacagtgcttcctttggacagagaggagatctcctggcataacatcacc
gtcctggccatggagatgaataaccccaggatgatcgggagtgtgtctgtagccgtgaag
attctggatgtgaatgataaccctccatcgctgacacagtactttgaagcctttgtctgt
gagcgcgcaaatgctggacagctgattcagacagtgacggcagtagacccagatgatcct
ctgggaggtcatcacttctactacagcctggccccagaggcagcaaacaaccccaacttc
acccttagagacaaccaagacaacacagcatggatcctgacgcgtcgtgggggctggtct
cagcaggatcagtcagtctactaccttcctatcttcatctcagatggagagcagccggtc
cagaccagcaccagcaccctgaccatccgtgtgtgtagctgtgatgtggacggcaacgtt
atgtcctgtaatgctgaggcctaccacctcccggctagtctgagcagaggggcgctcatc
gccatactggcatgtatcttcgtcctgctcgtgatgatcctgctcatgttgtccctccgg
agccaccgtaagaagccctacctgcacgatgaggaagacaacatccacgagaacattgtc
cgctacgatgacgaggggggcggagaggaggacaccgaggccttcgacatcgctgccatg
tggaacccccgcgaggcccacctagtggggaagcaacgtcaggacatgctgcctgagatt
gagagcctgtcgcgctacgttcccctggcatcagtgggagggccgggtagcggttgtggt
gatggaaacagcaacgttcaggggtatgtgctatctaagctcctggaggcggatctgaac
ccctgcgccccgccttacgactccctgcagacatacgcctacgagggggagggatcggtg
gccgagtccctgagctcgctgcagtctgggtgctccagtactgatcatgagtacgactat
ctcaatgactgggggcccagatttaagaaactggcagagatgtacggggctctagagacg
aacaaccctcccatgtggtag
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