Coregonus clupeaformis (lake whitefish): 121549547
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Entry
121549547 CDS
T08357
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121549547
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121549547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121549547
NCBI-ProteinID:
XP_041717280
LinkDB
All DBs
Position
34:complement(22514554..22586870)
Genome browser
AA seq
1357 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKTPGSDSDDEDKLHIVEEDGSMADGADCDSNVP
SEDHNGDHWDEVREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSHCSYTFAYRTQLE
RHMTAHKAGRDQRHVTQSGVNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPGAKASQCPSPAMPASPSSTQIWDKPFQEQLP
LNQIKSEPVDYEYKAMAVTPATTGVNGHGGGVLNGGAAAPLQGAVQAVMLPTMGLVSPIS
INLADLQNILKVAVDGNMIRQMLENNTKAAGTGTGATGVPHQQLISAISLPIIGQDGNAT
KIIINYSLDPSQTQTQLQTQLTAQNQKKEPQTLPTMPGQPRAQPQAEAAIEPCSKAQQRL
PEDLTLKEETTKTCLLCDNCPGGLDSFHALEHCKKASGLRINGDKSESVLSEGVGNQPKN
LLSLLKAYFALNAEPTKEEVSKISDSVSLPTDVVKKWFDKMQISQVSLGAPTPPSEEEGP
LSESPGATVVSPKVRPEQNTEGPTMMQSSPAEATPAEVNGSMRSPASPTPLNLTAGGPVP
AKPSSSDSTDGPLDLSLPKPTREEAAAAATYHATVYSHQDEPLNLTKTCTTKKELLIAGH
QVTSQPVSLYTASPQSANPISIMTTQLPSGTIYAITDQGRAGMPCLRAVTTSNNQTILIP
QLAYTYTTTATASSPAGTETQEKTTLQINGIKEERQDTSSESVSTMEELNDSDSAPSRKK
IRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLIEHMRLHS
GEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQEGGQGGIGEEVLEEEMESPVGLAL
GLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESEEEGEEEDMETAAGEEEEGDPDRVL
DMDDIQVVRIGDEGGNEEEEEEEEEEGEREEDTGQEEGDNEEEQGVERVVVGGEGEEGEE
EEEEGVVGVEVKEEQEEEEVTREKADTRQEEVQENREKEQEQAEKQVEEEQAEKQVEEEQ
AEKQVEEEQAERQVEEEQAERQVEEEEAERQVEEEQAERQVEEEEAERQVEEEQAERQVE
EEETERQMEEEQAERQVEEEQAERQVEEEQAEKQVEEEQAEKQVEEEQAERQVEEEQAEK
QVEEEQAEKQVEEEQAEWQVEEEQAEKQVEEEQAERHVEEEETIDTEKGVTSEDKEESGE
REAEESEVMKENEGETNRNTVSEDENQTPTGEKGDTN
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accaactacagtaatgtggtgaagacccctggctcagactcagatgatgaggacaagctg
cacatcgtggaggaggacgggagtatggcagacggggccgactgtgacagtaacgtaccc
agtgaagatcacaacggagaccactgggatgaagtgagggaggagtgtggttcagacggg
gaggacgatggcaggacagatgctctggtggaagagatgctgcagcagggagacacagcc
gtcatttacccagaagctccggaggacgagccacgccaggggacccccgaggccagcgga
catgacgagaacggcactccggatgcattctcccagctcctcacctgtccctactgctca
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccactgcagctacacttttgcctaccgcacacagctggag
agacacatgacggcccacaaagctggtagagaccagaggcacgtgacgcagtcgggggtc
aaccgaaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgt
ttctcccactcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcagcagtcaacggccgcccccggcccggcgccaaggcctcccaatgcccgtccccagcc
atgcccgcctcaccctcctccacacagatctgggacaaacccttccaggagcaactaccc
ctcaatcagatcaagagtgagccagtggactatgagtacaaggccatggcggtgactcca
gcaacgacgggagtgaacggtcatggaggaggggtgttaaacgggggtgcggcagccccc
ctgcagggtgcagtgcaggcagtgatgctccccaccatgggtctggtatctcctatcagc
atcaacctggcagacctgcagaacatcttgaaggtggcagtggacgggaacatgatcaga
cagatgttggagaacaacaccaaggcagcagggaccggcacaggggcgacgggtgttcct
caccagcagctcatctcagccatcagtctgcccatcatcggccaggacggcaacgccacc
aagatcatcatcaactacagcctggaccccagccagacccagacccagctccagacccag
cttactgcccagaaccagaagaaggaacctcagaccctgcctacaatgccaggccagccc
cgggctcagccccaggccgaggctgccatagagccctgcagcaaggcccagcagagactc
ccagaggacctgacactcaaagaggagaccactaagacctgcctgctctgtgacaactgc
cccggcggtctggactcgttccacgcactcgagcactgtaagaaagcctcaggcctcagg
atcaatggggacaaatcagagtcggtactgtccgagggggtcgggaaccagcccaagaac
ctcctgtccctccttaaggcctacttcgccttaaacgctgagcccaccaaggaggaggtc
agcaagatctcagactcagtcagcctgcccaccgacgtggtcaagaagtggttcgacaag
atgcagataagtcaggtctcactaggggctccgacccctccgtctgaggaagagggaccc
ttgtctgagagtcctggggccacagttgtgtcccctaaggtaagaccagagcagaacaca
gagggtcccaccatgatgcagtccagcccagccgaggccactccggctgaggttaacggc
tccatgcgctccccggcctcccccacaccactaaacctgactgccggggggcccgtccca
gccaaaccctcctcatcggacagcactgatggccctctggacctgtctctaccaaagccc
acccgagaggaggccgcagccgccgccacctaccacgccactgtttactcccatcaggac
gaacccctgaacttgacgaagacttgcacaaccaagaaagaacttctgatcgccggccac
caggtgactagccaacctgtgtccctgtacaccgccagcccacaaagtgccaaccccatc
agtatcatgaccactcagctgcccagcgggaccatttatgccatcactgaccagggccgt
gcaggcatgccctgtctccgggcggttaccaccagtaacaaccagactatcctcatccca
cagctggcctacacctataccactacagctacagccagcagccctgcagggacagagaca
caggagaagaccacactgcagatcaacggcatcaaggaggagcgtcaggacaccagctca
gagagcgtgtccaccatggaagagctgaatgactcagactccgccccttccaggaagaaa
attaggaagactgagagcgggatgtacgcctgcgacctgtgcgacaagatcttccagaag
agcagctctctgctccgacataaatacgaacacacaggcaagcgtccccacgagtgcggc
atctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgtctccactcc
ggagagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcactcgggctcctac
tcccagcacatgaaccaccgttactcctattgcaagaaagaggcgcaggaaggaggtcag
ggaggtataggggaggaggtgctggaggaggagatggagagccctgtggggttggccctg
ggcctgggaggggagcagcaggagcagtcagacagcaggcccacctcctcccacctggac
tctgacgagcgagggagcagcaccagggaggacgaggaggagagcgaggaggagggagag
gaggaggacatggagacagcagcaggggaggaggaggagggagatccggacagagttctg
gatatggatgatatacaggtggtgcggataggagacgagggagggaacgaggaggaagag
gaggaggaagaggaggagggggagagggaagaagacactggtcaagaggagggagataat
gaggaagagcagggagtggagagagtagtggtagggggtgaaggggaggaaggagaagaa
gaggaagaggagggagtagtgggggttgaagtaaaggaggagcaggaggaagaggaggtt
acaagggaaaaggcagacacaaggcaagaggaggtacaggagaacagggagaaagagcag
gaacaggctgagaagcaggtggaggaggagcaggctgagaagcaggtggaggaggagcag
gctgagaagcaggtggaggaggagcaggctgagaggcaggtggaggaggagcaggctgag
aggcaggtggaggaggaggaggctgagaggcaggtggaggaggagcaggctgagaggcag
gtggaggaggaggaggctgagaggcaggtggaggaggagcaggctgagaggcaggtggag
gaggaggagactgagaggcagatggaggaggagcaggctgagaggcaggtggaggaggag
caggctgagaggcaggtggaggaggagcaggctgagaagcaggtggaggaggagcaggct
gagaagcaggtggaggaggagcaggctgagaggcaggtggaggaggagcaggctgagaag
caggtggaggaggagcaggctgagaagcaggtggaggaggagcaggctgagtggcaggtg
gaggaggagcaggctgagaagcaggtggaggaggagcaggctgagaggcatgtggaggag
gaggagacaatagacacagagaaaggagtgacctcggaggacaaggaagagtcaggggag
agggaggcggaggaaagtgaggtcatgaaagagaatgaaggtgaaacaaacaggaacact
gtttcagaagacgagaaccagacaccgacaggagagaaaggagatacaaattaa
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