| Entry |
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| Name |
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
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| KO |
| K12626 | U6 snRNA-associated Sm-like protein LSm7 |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121549612
09123 Folding, sorting and degradation
03018 RNA degradation
121549612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cclu03019]
121549612
03041 Spliceosome [BR:cclu03041]
121549612
Messenger RNA biogenesis [BR:cclu03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121549612
mRNA degradation factors
5'-3' decay
Lsm complex
121549612
Spliceosome [BR:cclu03041]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121549612
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
34:complement(34130715..34131127)
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| AA seq |
111 aa
MADRNQDRNKEGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTI
EYLRDPDDQFKLTEDTQQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG |
|---|
| NT seq |
336 nt +upstreamnt +downstreamnt
atggcggacagaaaccaggacagaaacaaggaaggagagaaaaagaagaaagagagcatc
tttgacctgtcaaagtacattgataaacaaatccgtgtgaagtttcagggaggacgagag
gccagtggagttctgaaggggtttgaccccctgttgaacctggtattggatagcaccatc
gagtacttgcgggatcctgacgaccagttcaagctgaccgaggacacgcagcagctgggc
ctggtggtttgtagagggacgtccgtggtgctcatctgtcctcaggacggcatggaagcc
atccccaaccccttcatccagcagcaggacggatag |
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