Coregonus clupeaformis (lake whitefish): 121549674
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Entry
121549674 CDS
T08357
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121549674
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121549674
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121549674
Ion channels [BR:
cclu04040
]
Other channels
Mechanosensitive channel (Piezo)
121549674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM25-28
Piezo_TM1-24
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
121549674
NCBI-ProteinID:
XP_045066249
LinkDB
All DBs
Position
34:12613864..12668525
Genome browser
AA seq
2639 aa
AA seq
DB search
MSLFGISSVVQTDCSYTWMFRVNPALSWHHYVNPIMLLVLYYTLATLIRLWLQDPTDTAP
DVGEGEEPMVDDITPTAEKRRELWRMTHHTDDRNVLIVISNGSPPDYVPTNGPLGLDLYS
TPQYKPGQPGPDLESVYEVVVARGESLKEEMAAGAMAGAMAWVTAPEEGMARANAAVTAF
RFIMKQSYICALIAMMAWSITYVSWLTFVFLIWSCTLWMVRDRRQYAMITSPFMVFYGNL
LIILQYIWSFELLQPVPGLFLKKEVPFRELGSKMLCLLSFWLLLRQALTERKERQREEEV
LSDIRVIHAHKKEYEEVVDESGGHREMMEVVHESGGHREMMEMLGNTLMAMLNKYWIYIC
GGMFFFVSFEGRIVMYKIIYMMLLLFCVACYQVHYEWWRRMLKYFWMSVVVYTMLVLILV
YTFQFDSSIHVWSNMTGMSKDKLEDLGLEKFSVPALFTRIFIPTSFLLVCILHFHYFHQR
FLLLTDIKTVADKQKSTITRLVHLDGSLADISLIKPTLTVTNKDEEPGEKPQAGEKAQLE
EEDGKEEEEEEEKKRSYEEEEEEEDKRYEEPLEHCSKAESPVDEMSDLRSKWYLVVDRLT
VLFLKFLQYFQQLQRTIWWLLELHIIKIVSSYIIWVSVKEVSLFNYVFLVSWAFALPFSQ
FRPLASSVCTVWTCVIIVCKMLYQLTSINPSTYSKNCSMPLNYTDAQRSEMAHSLLYSAP
VDPANWVGLRKFSPLLENLRNNLLMLALLAFEVTIYRHQDLYRMKNNLTTPVTRTIFHDV
TRQHLDDSILNCAKYFINYFFYKFGLETCFLLAVNVIGQRMDFYAMLHAFGLIVVIYRRQ
RKAIADTWPKYCCFLACMLTFQYFVCIGIPPAACKDYRWRFPSSSTDSNVIKWLYFPDFH
TKPNPMFLLYDFMLLLCASLQRQVFEEENETAVCHLAGDNVEICRDLDAASFSQHNPVPD
FIHCRSYLDMLKVIMFSYMFWFVLTIIFITGTTRISIFCMGYLVACFYFLLFGGDLLLKP
IKSILHYWDFLIAYNVFVITMKNILSILACGYIKSLVTNHCWLIQLFSLACTIKGYSKPE
QQANKQCELPSDEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIRSSQILASRGAELFQ
ATIVKAVKARIEVEKKSMDLLKRQMDRIKSRQQKFKRGKERILSLAQESGDAGHGFTEDE
EDEDKEKADKERIREKKKKRWWRPWVDHASMVRSGNYYLFETDSEEEEEEEDKEVEEQPK
KSAFQFVYHAWMTDSKTAMKEHSKEKRSFWKKYTEGSSSKPRKEDLREAVHVVIEEEDQE
NREEKKTDGPDNVLKRVFNIVKFSWVLFLAMLDSVTAWINSMCQEHLDISTVLRIERCML
THEVKKGNKPSRESIHVYYRKQMCKATSIESGLEITEEETCQDCIPHKAERQSCACLKSQ
DSMVSHDSLSSAYTESTLLYSCRSTLDHTDMGPDNIQVPKTSERARPKLCKMDGLNLMST
SSADSGGSQASEHTQCTALCSRQETTDTIEEPDQDLQDPHSSYTETPSTSTSMGLYMDRD
GGLLSRSRGMDWDSGDSVLEAEQAGWGRGPCYAHQSELQLYQADLPSTTPTDTDIPPSYS
RATGLDREGAWYSRATGLDREGASYSRATGLDREGASYSRATGLDREGASYSRATGLDRE
GASYSRATGLDREGAERASSSRTHHEKRLVVVTPDEKSDFLSGVTSAAFPSLTHELTASD
LLRNRMFYDEELEDSERFYGDQPALLQLLYALYNMLVAHSEMVCFLVIILNHMISASVAT
LVLPIFIFLWAMLSVPRPSKRFWMTAIVYTEVTIVIKYFFQFGFFPFNQNIELDKSKPFH
PPNIIGVEKKEGYVHYDLVQLLALFFHRSILKCHGLWDEDDPRGGGGETPKQHQHEREKR
TSSRPVKKQASGGSSSLLESVRARFPHRFHSLSTPTPLRRKSSSSASHLSQCTMRSAHSK
GDSVSSRPSLRRGDSLQRGDSLRRGDSLRRGDSLRRGDSLRSKKEMILEKLREQLIKAKS
FTVRRTLEIYIPIRQFFYNLIHPEYSAVTDVYVLMFLADTVDFIIIVFGFWAFGKHSAAA
DITSSLSEDQVPEAFLVMVLIQFGTMIIDRALYLRKTVMGKVIFQVILVFGIHFWMFFIL
PGVTERRFSQNTVAQLWYFVKCIYFGLSAYQIRCGYPTRVLGNFLTKSYNYLNLFLFQGF
RLVPFLTELRAVMDWVWTDTTLSLSSWICVEDIYAHIFVLKCWRMSEKRYPQPRGQKKKK
VVKYGMGGLIVMLLICIVWFPLLFMSLVKSVAGVVNKPLDVSVTITLGGFQPIFTMSAQQ
NQLKDISKADFADFMNSYNYIPSAMQFLEAYTSEDVTVAELEGSSNSLWTISPPSRKNLM
EVLSKEEYFPVTMSWTIQRNLSLGAKAEVATDKHVTYLDMTMRQELIDLLNGTRNQAVVI
EQVFPCFLRAPSDSNAKPIEQLYKDNGYKNILLALERTHNSSGEIQEWWIVDQPSAGQIQ
MRGAAVGKKREAGLHLYVFSDKVSPPSLGFLAGYGIMGLYASVVLVIGKFVREFFSGISH
SIMFEELPAVDRILKLCTDIFLVRETGELELEEDLYAKLIFLYRSPETMIKWTRDQKTK
NT seq
7920 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttggtatctcgtcggtggtccagactgactgctcctacacctggatgttc
cgggtcaacccagcgctgtcctggcaccactatgtcaaccccatcatgctgctggtgctc
tactacaccctggccacgctcatacgcctctggctgcaggaccccacagacacggcgcct
gatgtgggcgaaggggaggagcctatggttgatgacatcacccccacagcagagaagagg
agagagctgtggaggatgactcaccacacagatgacagaaatgtgttgatagtaatctct
aatgggtctcctccggactatgtccccaccaacgggccgctggggctggacctgtactcc
acaccgcagtacaaaccaggccaaccagggccagacctggagagtgtgtatgaggtggtg
gttgcgcgtggcgagagtttgaaagaagaaatggcggcaggggcgatggcaggggcgatg
gcgtgggtgacggcgccggaggaaggaatggcgcgagctaatgcggcagtcacggccttc
aggttcatcatgaagcaaagctacatctgtgctctcatcgcaatgatggcgtggagtatc
acttatgttagctggctgacctttgtgttcctcatctggtcctgcacgctgtggatggtg
cgcgaccgccgccagtacgccatgatcacctcccccttcatggtattttatgggaacctg
ttgatcatcctacagtatatctggagctttgagctcctccaacccgtgcccgggcttttc
ttaaagaaagaggtgcccttccgggaactgggctccaagatgctgtgcctgctgagtttt
tggctgctgctgagacaggcgttgacagagagaaaggagagacagagagaagaggaggtg
ctgtcggacatcagggtcatccatgcccacaagaaggagtatgaggaggtggtggatgag
agcggtggccacagggagatgatggaggtggtgcatgagagcggtggccacagggagatg
atggagatgctaggcaacaccctcatggccatgttgaacaagtactggatctacatctgc
ggcggcatgttcttcttcgtcagcttcgagggacgcatcgtcatgtacaagatcatctac
atgatgctcctcctcttctgtgtggcctgctaccaggtgcactatgaatggtggaggagg
atgctgaagtacttttggatgtctgtggtggtctacaccatgctggtcctcatcctggtc
tacaccttccagtttgactcctccatccacgtctggtccaacatgaccggaatgagcaaa
gacaaactggaggacctgggtctggagaagttctctgtcccggctctgttcacgaggatc
ttcatccccacctccttcctgttggtctgcatcctccacttccactacttccaccagcgc
ttcctgctgctcactgacatcaagacggtggccgacaagcagaagagcacaatcaccagg
ctggtgcacctagatggcagtctagcagacatctctctgatcaaaccgaccctcactgtg
accaacaaagatgaggagcctggggagaagccgcaggctggggagaaggctcagctggaa
gaggaagatgggaaggaggaggaggaggaggaggagaagaagagaagttatgaggaggag
gaagaggaggaggataagaggtatgaagaacccctggagcactgcagcaaggcggagtcc
ccggtcgacgagatgtcagacctgaggagtaagtggtatctggtggtggaccgcctcacg
gtgctcttcctcaagtttctgcagtacttccagcagctgcagcggaccatctggtggctg
ctggagctccacatcatcaagatcgtctcatcctacatcatctgggtctcagtcaaagag
gtgtctctgttcaactatgtgttcctggtgagttgggcgttcgccctgcccttcagtcag
ttcaggcccctggcctccagcgtctgtaccgtctggacctgcgtcatcatcgtctgcaag
atgctctaccaactcacctctataaacccctctacgtactctaagaactgctccatgcct
ctgaactacacggatgcccagaggagtgagatggcccactccctgctctacagcgcccct
gtggaccctgccaactgggtgggcctccgcaagttctccccgctactggagaacctgagg
aacaacctgttgatgctggccctgctggcgttcgaggttaccatataccgccaccaggac
ctgtaccgcatgaagaacaatctcaccacgcccgtcaccagaaccatcttccacgacgtc
acccgacaacacctcgacgacagcatcctcaactgtgccaagtacttcatcaactacttc
ttctacaagttcggcctggagacatgcttcctgttggcggtgaacgtgattggccagagg
atggacttctacgccatgctccacgctttcggcctgatcgtggtcatctaccggcggcag
cggaaggcaatcgctgacacctggccgaagtactgctgcttcctggcctgcatgctcacc
ttccagtactttgtctgcattggcatccccccggccgcctgcaaagactaccgatggagg
ttcccctcgtcctccacagactccaacgtcatcaagtggctgtacttccctgacttccac
accaaacccaaccccatgttcctgctctatgacttcatgctgctgctgtgtgcctcgctg
cagagacaggtgtttgaggaggagaatgagacagccgtgtgccacctggccggggacaac
gtggagatctgcagagacctggacgccgcttccttcagtcagcacaaccccgtcccagac
ttcatacactgcagatcctacctggacatgctgaaggtgatcatgttcagctacatgttc
tggttcgtgctcaccatcatcttcataacgggcacaacgcgcatctccatcttctgtatg
ggctacctggtggcctgcttctacttcctgctcttcgggggcgacctgctgctcaagcca
atcaaaagcatcctgcactactgggacttcctgatcgcctacaacgtgtttgtgatcacc
atgaagaacatcctctcgatactagcctgtggatacataaagtccctggtcaccaatcac
tgttggctcatccagctcttcagcctggcctgcactataaagggctattctaagcctgag
caacaggccaacaagcagtgtgagttgcctagcgacgaggcaggcatcatctgggacagc
atctgttttgccttcctgttgctacagcgacgcgtattcatgagctactacttcctgcac
gtggtcgccgacattcgctcctcacagatcctcgcctccagaggggctgagctattccag
gcgaccatagtgaaagctgtcaaagccaggatcgaagtggagaagaagtccatggacttg
ctgaagagacaaatggaccgcatcaagagtcggcagcagaagttcaagagggggaaggag
aggattttgagcttagcgcaggagagcggagacgcaggccacggcttcaccgaggacgag
gaggatgaagataaagaaaaggcagacaaagagaggatcagggagaagaaaaagaagcgg
tggtggagaccgtgggttgaccatgcatccatggtgagaagtggtaactattacctgttt
gagacggacagtgaagaagaggaggaggaggaggataaagaggtggaagagcagcccaag
aagtctgcatttcagtttgtgtaccacgcctggatgaccgactccaagacggccatgaag
gagcacagcaaggagaaacgcagcttctggaagaaatacactgaagggagcagcagcaag
ccaaggaaagaggacctgagggaagcagttcatgttgttatcgaagaggaggaccaggag
aacagagaggagaagaaaacagatggaccagacaacgtcctgaagcgagtcttcaacatc
gtcaagttctcctgggtgttgttcctggccatgttggacagcgtcacagcctggatcaac
tccatgtgtcaggaacacctggacatctccaccgtgctgcgcatcgagcgctgcatgctc
acacacgaggtcaaaaaggggaacaagccttcccgggagagcatccacgtgtactaccgc
aagcagatgtgcaaggcgacgtccattgagtcgggcctggagataaccgaggaggagacg
tgccaggactgcatccctcacaaggctgagaggcagagctgtgcctgtctgaagagccaa
gactctatggtgtctcacgatagcctgtccagtgcgtacacagagagcacactgctctac
tcctgtcgctccactctggaccacactgacatgggtcctgacaacatccaggtgcccaag
accagcgagcgtgcccgtcctaaactctgcaagatggatgggctgaatctaatgtccacc
tcctcagctgacagcggaggcagccaggccagtgagcacacccagtgcacagccctctgc
tcccgccaggagaccaccgacaccatcgaggagccagaccaggacctccaagacccccac
tcctcttacactgagaccccatccacctctacctctatggggctgtacatggaccgtgat
gggggtcttctctccaggtccaggggtatggactgggacagcggggacagcgtcctggaa
gccgaacaggcagggtgggggaggggaccgtgctacgcccaccagagtgagctccagctc
taccaggcagacctccccagtacaacccccacagacacagacatccccccctcgtacagc
agagccacaggcctggacagggagggggcctggtacagcagagctacaggactggacagg
gagggggcctcgtacagcagagctacgggcctggacagggagggggcctcgtacagcaga
gctacgggcctggacagggagggggcctcgtacagcagagccacgggcctggacagggag
ggggcatcgtacagcagagccacgggcctggacagggagggggctgagcgggcctcatcc
agtaggacgcatcatgagaagaggttggttgtggtgacacctgacgagaagtctgatttt
ctgtcgggcgtcacgagcgccgcgtttccctcgctcacccacgagctgacggccagcgat
ctgctacgcaataggatgttctacgatgaagagttggaggattcagagcgtttctacggc
gaccagccggcgctgctgcagctgctttatgccctgtacaacatgctggtggcccactca
gagatggtgtgtttcctggtcatcatcctcaaccacatgatctcagcgtccgtggccacc
ctcgtcctgcccatcttcatcttcctctgggccatgctgtcggtccccaggcctagcaaa
cgtttctggatgaccgctatcgtctacacagaggtcaccattgtgatcaagtacttcttc
cagtttggtttcttccccttcaaccagaacattgagctggacaagtcaaaaccgttccat
cctcccaacatcatcggtgtggagaagaaggagggatatgtgcactatgacctggttcag
ctgctagctctgttcttccaccgatctattctcaagtgtcatgggctgtgggatgaggat
gaccccaggggaggagggggggaaacccccaagcagcaccagcatgagagggagaagagg
accagctccaggccagtgaagaagcaggcctcggggggcagcagctccctgctggagtcg
gtccgcgcacgcttcccccaccgcttccactccctgtccacccccaccccactgcgccgc
aagagctccagctccgcctcccacctttcccagtgcaccatgcgctccgcccactccaaa
ggagacagtgtgagctcacggcccagcctgcggagaggggacagcctgcagagaggggac
agcctgcggagaggggacagcctgcggagaggggacagcctgcggagaggggacagcctg
cggagcaagaaggagatgatcctggagaaactcagagagcagctcatcaaagccaagagc
ttcactgtcagaagaactctggagatctacatccccatccgtcagttcttctacaacctg
atccacccagagtacagtgcggtgacagacgtctatgtgctcatgttcctggccgacacc
gtcgacttcatcatcatcgtcttcggcttctgggcttttgggaaacactctgcggcggct
gacatcacttcttccctgtcggaggaccaggttcccgaagccttcctggtgatggtgctg
atccagtttggcaccatgatcatcgaccgagccctctaccttcgcaagaccgtcatggga
aaagtcatcttccaggtcatcctggtgtttggtatccacttctggatgttcttcatcctg
cctggagtcacagagagacggttcagtcagaacacagtggcccagctgtggtacttcgtc
aagtgcatctactttggcctgtcggcctatcagatccgctgtggctaccccacccgcgtc
ctgggcaacttcctcaccaagagttacaactacctcaaccttttcctcttccaagggttc
cgcctggtcccattcctgacggagctgcgagcggtgatggactgggtgtggacggacacc
accctcagcctgtccagctggatctgtgtagaggacatctacgcccatatctttgtcctc
aagtgctggaggatgtcagagaagaggtacccccagcctcgcgggcagaagaagaagaag
gtggtgaagtatgggatgggaggtttgattgtcatgctgctcatctgcatcgtttggttc
ccgctgctcttcatgtcgctggtcaagtccgtggccggggtggtcaacaaacctctggac
gtgtcggtcaccatcaccctgggaggctttcagcccatcttcactatgagtgcccagcaa
aatcaactgaaggacatcagcaaagcagattttgcagacttcatgaattcatacaattac
attccgtcagcgatgcagttcctggaggcgtacacgtcagaggacgtgactgtggcggag
ctggagggcagttccaactccctgtggaccataagcccccccagcaggaagaacctgatg
gaggttctcagcaaggaggaatacttccctgtcaccatgtcctggaccatccagaggaat
ctcagtcttggagccaaagctgaagttgcaacagataaacatgtcacataccttgatatg
acaatgcgacaagagttaatagatctgctgaatgggaccagaaaccaggctgtggtgata
gaacaagttttcccatgcttcctcagagctcccagtgactccaatgccaaaccaatagaa
caactctataaagacaatggctacaaaaacatcctgctagccctggagagaacccacaac
agcagtggagagatccaggagtggtggattgtggaccagccttcggcgggacagatacag
atgaggggtgcggcagtggggaagaagagagaggcgggcctccatctctacgtgttcagt
gacaaagtcagcccgcccagtctgggcttcttggcaggatacgggatcatgggtctctac
gcctcggtggtgctcgtcatcggcaagtttgtgcgcgagttcttcagcggcatctcgcac
tccattatgttcgaggagctgcctgccgtggaccgcatcctgaagctgtgtaccgacatc
ttcctggtcagagagacgggcgagctggagctggaggaagacctgtatgccaagctcatc
ttcctctaccgatcacctgagactatgatcaagtggaccagggaccagaaaacaaagtga
DBGET
integrated database retrieval system
