Coregonus clupeaformis (lake whitefish): 121549731
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Entry
121549731 CDS
T08357
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121549731
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Patched domain-containing proteins
121549731
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
HTH_Tnp_Tc5
DUF6926
Motif
Other DBs
NCBI-GeneID:
121549731
NCBI-ProteinID:
XP_041717512
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Position
34:complement(6335671..6350084)
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AA seq
858 aa
AA seq
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MAGCNTDCVEKPIAKGFEIFGRFVGRHPWCFLILPMFISAGLGGGFYFLADREANGIEEM
FTPIDGPAKDERQVVKKYFPQDDSDFSRLRLYTEGTFASLIIVTPTANILTIPAFTKIVA
IDSEVKAIEVETFHFSNLCVKKGGVCVSNSIFDIVKPPNNVTTTTIDYPYHDKLFIASEV
GGVKLKTGSTEIVSAKAIRLFYFLKEDNQTVNTMWLQKFIETASMMQKEEGMTISYFTSI
SRDEEFEKSSDSIIPLFSLTYALAITFSIISCLRLDCVRNKVWVATFGVLSAGMAVLSSF
GLLLYCGMPFAMTVATAPFLILGIGVDDMFIMISCWQKTQVHDDVEDRMAATYKEAAVSI
TITTLTDALAFYIGLLTPFGSVQSFCMYTGTAVLFCYLYNITFFGAFLSLNGRREKGNRH
WLTCTKVPEPEENSEKYNICCVGGAYDHETGEEEPMPINNFFKMYYGPFLTNTWTKGFVI
LLYAGYLGSSIYGCFQIKEGIDLKNLAADSSYVGSYYDNDDEFFSEYGPNVMVVLTDSEF
KYWDESARNNLYSCLQNFEGLSMVSQNMTISWLNEYLTFGKLTNLNLSEENTFKSNLSAF
LKRSDFVHDVNFTDNILYASRMFIQTVNVSTAVDEKNMLNELRETANDSSVKLIVYHPAF
IYFDQYAVIVNNTIQNIVVATLAMLVISLMLIPNPICSLWVTFAIASVIVGVAGFMAFWH
VNLDSVSMINLVICIGFSVDFSAHISYAFVSSDKRTANEKAVDAVYHLGYPILQGAVSTI
LGVVVLSAAESYIFRTFFKIMFLVISFGVLHGIVFIPVFLSFFGICGAKAGDEKDDPPYN
PYQSKRKKNDNIACESHL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtgcaacacagactgcgttgagaagcctatagctaagggatttgaaatattt
gggcgttttgttggtagacacccctggtgttttttgattctacccatgttcatctctgcg
ggtcttggcggaggattttacttccttgcggacagagaagcgaacggcattgaagagatg
tttacacctattgatggacctgccaaagatgaacgacaagtagttaaaaaatactttcca
caggatgatagcgacttctctcgtttgcgactctatactgaagggacctttgcatctctc
ataattgtaacgcctacagcaaatatcctcacaattcctgcttttacaaaaattgttgct
attgatagtgaagtgaaagccattgaagtagaaacatttcatttctcaaacctttgcgtt
aagaaaggtggtgtgtgcgtgtcaaattcaatctttgatattgtaaaacctcccaataat
gttaccacaacaactattgattacccatatcatgacaaacttttcatcgcatctgaagtc
ggtggtgtgaaactgaaaactggatcaactgaaattgtaagcgcaaaggccattcgactt
ttttacttcttaaaagaagacaaccagactgtaaatacgatgtggctgcagaagtttata
gagactgcgtcgatgatgcaaaaagaagaaggcatgaccatatcttatttcacatcaata
tcaagggatgaagagtttgagaagagttctgactcaatcatacctctcttctcattgacc
tatgccctggccatcactttttcaatcatttcttgtttgaggttggactgtgtgaggaat
aaggtgtgggtggcaacctttggtgtcctctcagctggtatggcagtgctgtccagtttt
gggttgttgctgtactgtggcatgcccttcgctatgactgtggctacagctccgttcctg
attctgggaattggtgttgacgacatgttcatcatgatttcttgctggcagaagactcaa
gttcacgatgacgtagaggatcgtatggcagcaacatacaaagaggcagctgtttctatc
accatcacaacactaactgatgccctggctttctatattggtctgttaactccctttggt
tctgtacagtccttttgtatgtatactggcacagctgtcctgttctgctacttgtacaac
atcaccttctttggtgcatttctgtcactgaatggaagacgtgaaaagggcaacagacat
tggctgacctgcacgaaggttccagaaccagaggagaattctgaaaagtacaatatctgc
tgtgtagggggagcttatgatcatgaaacgggagaagaggaaccaatgccaattaacaac
ttctttaagatgtactatggtccatttctaacaaatacttggaccaaggggtttgtgatc
ctgctctatgctggatatttgggctcaagcatctatggttgcttccaaatcaaagagggc
atagaccttaaaaacctagcagctgatagctcatatgtgggtagctattatgataatgac
gacgaattcttttcagagtatggcccaaatgttatggttgttctgacagatagtgagttt
aaatattgggacgaaagtgctcggaataatctttactcctgcctccaaaactttgaaggt
ctatcaatggtttctcaaaacatgaccatatcttggctcaatgaatatcttacgtttgga
aagctgaccaatttgaatctaagtgaggaaaatacattcaaaagtaatttgtctgcattt
cttaagaggtctgatttcgtacatgatgtgaattttacagataacatattatatgcgtca
cgtatgttcattcagacggtcaatgtcagtacagctgttgatgaaaagaacatgttgaat
gaacttcgagagacggctaatgatagttcagtaaagttgattgtttaccaccctgctttc
atttactttgaccagtatgcagtcattgttaataataccatccaaaacattgtagttgcc
actcttgccatgctggtcatctccctcatgttgatccccaaccccatatgttctctgtgg
gtgacctttgccattgcctctgtcatagtgggtgttgctggtttcatggcattttggcat
gtcaatctagactctgtatccatgatcaatcttgtcatctgcatcggtttctccgtggac
ttttctgctcacatttcctatgcctttgtctctagcgataagagaaccgctaatgagaag
gctgtagacgctgtctatcacttggggtatcccatcttacagggagctgtgtctactatt
ttaggagtggtggtgctgtctgcagctgagagctacatcttcagaaccttctttaagatc
atgttcttggtcatttcgtttggggtacttcacggcatcgtgttcatccctgtttttttg
tccttctttggaatctgcggcgctaaagctggcgatgaaaaagacgaccctccttataat
ccctatcaatcgaaacggaaaaagaatgataacattgcctgtgaaagccatttgtga
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