Coregonus clupeaformis (lake whitefish): 121549753
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Entry
121549753 CDS
T08357
Name
(RefSeq) nucleoporin p58/p45-like isoform X2
KO
K14307
nucleoporin p58/p45
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121549753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121549753
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121549753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
XAC0095_dom
Nup49_C
MSC_0620_UU052
JAKMIP_CC3
PSY3
FapA
Tox-ODYAM1
His-Xaa-Ser_sys
PBC
Motif
Other DBs
NCBI-GeneID:
121549753
NCBI-ProteinID:
XP_041717550
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Position
34
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AA seq
591 aa
AA seq
DB search
MSGFNFGSGAIGSTNTGGGFSFGAAASTPAAAGTGGFTLSGALGTTALATTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAVAPTQGLTLGAPAASTAPTTGFSMAFNKPSASAQPFSLT
AASSAPTGAGLTLGSVLTSTAPQQGASGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTG
LGQTTLGSGGLTLGSLVSTSAAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKALKD
EHLPPVICQDVDNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGLQRN
ALAIDKLKMETAQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYRQQI
EELENHLTTQGSGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYRRAF
LEDSTDVFESKRVASKTWQSAPRITTGPAPFSSVPNAAAVAMAATLSQQQQPGPGSQASL
GSGLGNPFALGVGSSLGTSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGFGSS
SSSGFNFSNPGLNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccggggctattggttccaccaacactggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgagt
ggagctctgggcactacagccctagccaccaccaccaccacctcttctctggggctgggg
gggtccctgttctctcagaaacctactggggggttctcctttaacactcctgcctcagga
gctgttgcacccacccaaggccttacattaggtgccccagcagcctctacagcccccacc
acgggcttcagtatggccttcaataaaccctctgcctcggcccaacccttctccctcact
gcagcctcctcagcccccacaggggcaggactgacactaggctccgtcctcacctccacc
gcgccacagcaaggagcctcaggattctctctcaacctagggggtgtggctgcaagtaca
gccccatccacaggtctatcgctgggttccagtatgttctctaacatggctactactggt
ttgggccagaccactcttggatcaggggggttgacgttgggttccctggtctctacctcc
gcggcggtctcagcggcccccagccttggactgggtggagtcgacttcagcacctcctca
gagaagaaaagcgacaaatcatcaggggccagcccacaggacagtaaagctttgaaagat
gaacatttgcctccagtcatctgtcaggatgtagacaacttccagaagtttgtgaaggag
caaaagcaagttcacgaggagatcagcaggatgtcttctaaagccatgctgaaggttcag
gatgacatcaagagtctcaaacagctgctgtctgtcagcgcctcgggactacagagaaac
gccctggctatagacaaactgaagatggagaccgcacaggagttgaagaatgcagacata
gctctgcggactcagaagactccccctggactccaacacgacaacacagctccctatgat
tatttccggtgtttagtggaacagtttgaggtccagctgcagcagtacagacagcagata
gaggaactggagaatcacctcactacacagggcagtggatcacacatcacaccacaggat
ctttcactggccatgcagaagttgtaccagacgtttgtggctctggctgctcagctccag
tcagtacacgagaacgtcaagaccctgaagcagcagtacctggggtaccgccgggccttc
ctggaggactccacggacgtcttcgagtccaagagggtggccagtaagacgtggcagagc
gccccacgcatcaccaccggccccgcccccttcagcagcgtccccaatgcggcggcggtc
gccatggcagccacgctgagccagcagcagcagcccggcccagggagccaggcgtccctg
gggtctggcttgggaaacccctttgccttgggagtggggtctagcttgggcacctcaggc
cttggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggctcctcattt
ggtttctcttctgccagcaagccctcgggagggagcctgagtgcaggttttggtagcagc
agtagttcagggtttaacttcagtaaccccggcctcaacgcgtctgcaggcctgacgttt
ggcgtgtccaaccctcccgcaacaggcttcggcacgggaggtccactgctgcagctcaag
aagcccccagtgggaaacaagaggggcaagagatag
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