Coregonus clupeaformis (lake whitefish): 121549775
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Entry
121549775 CDS
T08357
Symbol
cul1b
Name
(RefSeq) cullin-1b
KO
K03347
cullin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04120
Ubiquitin mediated proteolysis
cclu04141
Protein processing in endoplasmic reticulum
cclu04310
Wnt signaling pathway
cclu04340
Hedgehog signaling pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121549775 (cul1b)
04120 Ubiquitin mediated proteolysis
121549775 (cul1b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121549775 (cul1b)
04340 Hedgehog signaling pathway
121549775 (cul1b)
04350 TGF-beta signaling pathway
121549775 (cul1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121549775 (cul1b)
04114 Oocyte meiosis
121549775 (cul1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121549775 (cul1b)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
121549775 (cul1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
121549775
NCBI-ProteinID:
XP_041717587
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Position
34:complement(18077259..18089452)
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AA seq
776 aa
AA seq
DB search
MSSNRNQNPHGLKQIGLDQIWDDLRAGIHQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSAVPTKPSKKSSTPGGAQFVGLELYKRLKEFLKNYLTSLLMDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIEKERNGETINTRLISGVVQSYVELGLNEEDAFAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARRCEQVLIEKHL
EIFHTEFQNLLDADKNQDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLNVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNTVTKMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTVDLYSVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENANIDE
VEFKPETLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDMYSYLA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaacaggaaccagaacccccatgggctgaagcagatcgggctggaccagatc
tgggatgacctgagggccggcatccaccaggtgtacacacggcagagcatggccaagtca
cgctacatggagctctacacccatgtgtataactactgtaccagtgtgcaccagtccagt
cagggccgggggtctgccgtccccaccaagccctccaagaagagcagtactcctgggggg
gcccagttcgtaggcctggaactctacaagagactcaaggagtttctcaagaactaccta
accagtctgctcatggatggcgaggacctgatggatgagtgtgtgttaaagttctacaca
cagcagtgggaggactaccggttctccagtaaggtgctgaatgggatctgtgcttacctc
aacaggcactgggtcagacgtgagtgtgacgagggacgcaagggcatctacgagatctac
tcgttggctttggtaacgtggagggagtgtctgttcagacccctaaacaaacaggtaacg
aatgcggtcctgaagctgatagagaaggagaggaatggagagaccatcaacaccagactc
atcagtggtgtggtgcagtcctacgtggagctggggctgaatgaggaggatgcgtttgct
aagggtcctacactgtcagtgtataaagaatactttgagtgccagttcctcacggatact
gaacgcttctacacacgagagagcaccgagttcctccaacagaaccctgttactgagtac
atgaagaaggcggaggcccgtctgctagaggaacagaggcgtgtgcaggtgtacctccat
gagtccactcaggatgagctggccaggcggtgtgaacaggtgctcatagagaaacacctg
gagatcttccacacagagttccagaacctactggatgctgacaagaaccaagatctaggt
cggatgtataacttggtgtctcgaataacggatggtctgggagagctaaagaaactccta
gaaacacacatccacaaccagggcctggccgctatagagaaatgtggagaggccgctctc
aacgaccctaaggtgtatgtccagaccactctgaacgtccataagaagtacaacgctctg
gtcatgtctgccttcaacaacgacgctggcttcgtagctgctctagacaaggcgtgtggt
cgtttcatcaacaacaacacagtcactaagatggcccagtcctccagcaaatcacctgaa
ctactggctagatactgtgactctctgctcaagaagagttctaagaacccagaagaggca
gagttggaggacacactcaaccaagtgatggtggtgtttaagtacatagaggacaaggat
gtgttccagaagttctatgctaagatgctggctaaacgcctcgtccaccagaacagtgct
agcgacgacgcagaggctagcatgatctccaaactcaagcaagcgtgtggctttgagtac
acatctaaactacagaggatgttccaggacatcggagtcagcaaagatctcaacgaacag
ttcaagaaacacctgactaactctgaacctctcgacttggacttcagtatccaggtgttg
agttcaggttcctggccgttccagcagtcgtgcaccttcgctctgccctccgagttggag
cgtagctaccagcggttcaccgcgttctacggcagcagacacagcggtcggaaactcacc
tggctctaccacctgtctaaaggagagctggtcaccaactgctttaaaaacaggtacact
ctgcaggcctctaccttccagatggctatcctgttgcagtacaacacagtggacctgtac
tccgtacaacaactcactgacagcacccagatcaaaaccgacattctggttcaagtgttg
cagatcttgttgaaatccaaattgctggtcctggaggatgagaatgctaacatagacgag
gtggagttcaaaccagaaaccctgatcaaactcttcctgggatacaagaataagaagctg
cgtgtgaacattaacgttcctatgaagactgaacagaagcaggagcaggagaccacacac
aagaacatagaggaggaccgcaaactcctcatacaggctgccatagtgaggataatgaag
atgaggaaggttctgaaacaccagcagctcctggctgaagtcctaaaccagctttcgtcc
cgcttcaaacccagagtccctgtcattaagaagtgtatagacatcctgatagagaaggag
tatctggagagagtggacggagagaaagacatgtacagctacctggcttaa
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