KEGG   Coregonus clupeaformis (lake whitefish): 121549775
Entry
121549775         CDS       T08357                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b
  KO
K03347  cullin 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110  Cell cycle
cclu04114  Oocyte meiosis
cclu04120  Ubiquitin mediated proteolysis
cclu04141  Protein processing in endoplasmic reticulum
cclu04310  Wnt signaling pathway
cclu04340  Hedgehog signaling pathway
cclu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121549775 (cul1b)
   04120 Ubiquitin mediated proteolysis
    121549775 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121549775 (cul1b)
   04340 Hedgehog signaling pathway
    121549775 (cul1b)
   04350 TGF-beta signaling pathway
    121549775 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121549775 (cul1b)
   04114 Oocyte meiosis
    121549775 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121549775 (cul1b)
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     121549775 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 121549775
NCBI-ProteinID: XP_041717587
LinkDB
Position
34:complement(18077259..18089452)
AA seq 776 aa
MSSNRNQNPHGLKQIGLDQIWDDLRAGIHQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSAVPTKPSKKSSTPGGAQFVGLELYKRLKEFLKNYLTSLLMDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIEKERNGETINTRLISGVVQSYVELGLNEEDAFAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARRCEQVLIEKHL
EIFHTEFQNLLDADKNQDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLNVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNTVTKMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTVDLYSVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENANIDE
VEFKPETLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDMYSYLA
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgtcgtccaacaggaaccagaacccccatgggctgaagcagatcgggctggaccagatc
tgggatgacctgagggccggcatccaccaggtgtacacacggcagagcatggccaagtca
cgctacatggagctctacacccatgtgtataactactgtaccagtgtgcaccagtccagt
cagggccgggggtctgccgtccccaccaagccctccaagaagagcagtactcctgggggg
gcccagttcgtaggcctggaactctacaagagactcaaggagtttctcaagaactaccta
accagtctgctcatggatggcgaggacctgatggatgagtgtgtgttaaagttctacaca
cagcagtgggaggactaccggttctccagtaaggtgctgaatgggatctgtgcttacctc
aacaggcactgggtcagacgtgagtgtgacgagggacgcaagggcatctacgagatctac
tcgttggctttggtaacgtggagggagtgtctgttcagacccctaaacaaacaggtaacg
aatgcggtcctgaagctgatagagaaggagaggaatggagagaccatcaacaccagactc
atcagtggtgtggtgcagtcctacgtggagctggggctgaatgaggaggatgcgtttgct
aagggtcctacactgtcagtgtataaagaatactttgagtgccagttcctcacggatact
gaacgcttctacacacgagagagcaccgagttcctccaacagaaccctgttactgagtac
atgaagaaggcggaggcccgtctgctagaggaacagaggcgtgtgcaggtgtacctccat
gagtccactcaggatgagctggccaggcggtgtgaacaggtgctcatagagaaacacctg
gagatcttccacacagagttccagaacctactggatgctgacaagaaccaagatctaggt
cggatgtataacttggtgtctcgaataacggatggtctgggagagctaaagaaactccta
gaaacacacatccacaaccagggcctggccgctatagagaaatgtggagaggccgctctc
aacgaccctaaggtgtatgtccagaccactctgaacgtccataagaagtacaacgctctg
gtcatgtctgccttcaacaacgacgctggcttcgtagctgctctagacaaggcgtgtggt
cgtttcatcaacaacaacacagtcactaagatggcccagtcctccagcaaatcacctgaa
ctactggctagatactgtgactctctgctcaagaagagttctaagaacccagaagaggca
gagttggaggacacactcaaccaagtgatggtggtgtttaagtacatagaggacaaggat
gtgttccagaagttctatgctaagatgctggctaaacgcctcgtccaccagaacagtgct
agcgacgacgcagaggctagcatgatctccaaactcaagcaagcgtgtggctttgagtac
acatctaaactacagaggatgttccaggacatcggagtcagcaaagatctcaacgaacag
ttcaagaaacacctgactaactctgaacctctcgacttggacttcagtatccaggtgttg
agttcaggttcctggccgttccagcagtcgtgcaccttcgctctgccctccgagttggag
cgtagctaccagcggttcaccgcgttctacggcagcagacacagcggtcggaaactcacc
tggctctaccacctgtctaaaggagagctggtcaccaactgctttaaaaacaggtacact
ctgcaggcctctaccttccagatggctatcctgttgcagtacaacacagtggacctgtac
tccgtacaacaactcactgacagcacccagatcaaaaccgacattctggttcaagtgttg
cagatcttgttgaaatccaaattgctggtcctggaggatgagaatgctaacatagacgag
gtggagttcaaaccagaaaccctgatcaaactcttcctgggatacaagaataagaagctg
cgtgtgaacattaacgttcctatgaagactgaacagaagcaggagcaggagaccacacac
aagaacatagaggaggaccgcaaactcctcatacaggctgccatagtgaggataatgaag
atgaggaaggttctgaaacaccagcagctcctggctgaagtcctaaaccagctttcgtcc
cgcttcaaacccagagtccctgtcattaagaagtgtatagacatcctgatagagaaggag
tatctggagagagtggacggagagaaagacatgtacagctacctggcttaa

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