Coregonus clupeaformis (lake whitefish): 121549794
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Entry
121549794 CDS
T08357
Name
(RefSeq) tumor necrosis factor ligand superfamily member 10
KO
K04721
tumor necrosis factor ligand superfamily member 10
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04068
FoxO signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121549794
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121549794
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121549794
04217 Necroptosis
121549794
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121549794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121549794
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121549794
04090 CD molecules [BR:
cclu04090
]
121549794
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121549794
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Tumor necrosis fators
121549794
CD molecules [BR:
cclu04090
]
Proteins
121549794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
121549794
NCBI-ProteinID:
XP_041717614
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Position
34:complement(17559324..17567275)
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AA seq
291 aa
AA seq
DB search
MAGGSSGFTFLGVLLLAAILLQTVAVTVTVLYFTNVLNTMKETFARSSVSCLTRSDLRGG
YVRSPTEGKGDPCWQVTQQLHTLIEKSLFQRYQREISSAVRDEMSRVLPSLAMEDQVSSR
PKVAAHVTGSFAPKAEREGGGSPGRRVQGQKISWWEGHKGLAFLQDVQLIDGELVVPRPG
LYYIYAQTYFRHTHPGGEEGDEEVEEEKEQRGRPMLQYVYKKVSSYPVPILLMKTSRTSC
WSRDSQFSLHSAHQGGLFPLAAGDRLLVTVSNASAIDMDERSSFFGAVLVS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggctcgagcggcttcacatttctcggggttctgctgctcgcggcgattctg
ctgcagactgtggccgttaccgtcactgtgctctacttcactaacgtcctcaacacgatg
aaggagacgtttgcaaggagcagtgtgtcttgtctgacacggtctgacctcagagggggg
tatgtgcgctccccgaccgaggggaaaggagacccctgttggcaggtcacacagcaacta
cacaccctcatagagaagtctctgtttcagcggtatcagagggagatctcctcagcagtt
agagacgagatgtccagggtgttgccctcattggcaatggaggaccaggtttcttctcgc
cccaaagtcgccgcccatgtcactggtagcttcgctcccaaagcagagagggagggagga
ggttctcctgggcggcgtgtgcaggggcagaagatctcatggtgggaggggcataaaggg
ctggcattccttcaggacgttcaattgattgacggggagctggtggtgcctcgcccagga
ctctactatatctacgcccagacctacttcagacacacccaccctgggggagaggagggg
gatgaagaggtggaagaggagaaggagcagagggggagacccatgttgcagtatgtttat
aagaaagtgtcgtcctacccggtacccatcctgctgatgaagaccagccggacctcctgc
tggtcccgggactcccagttctctctacactccgcccaccagggggggctgttcccattg
gccgccggggaccgcctcctcgtcaccgttagcaacgcctccgccatcgacatggatgag
aggagcagcttttttggggctgtcctggtcagctag
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