Coregonus clupeaformis (lake whitefish): 121549819
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Entry
121549819 CDS
T08357
Symbol
tfr1b
Name
(RefSeq) transferrin receptor 1b
KO
K06503
transferrin receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03273
Virion - Lassa virus and SFTS virus
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04216
Ferroptosis
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121549819 (tfr1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121549819 (tfr1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121549819 (tfr1b)
04145 Phagosome
121549819 (tfr1b)
09143 Cell growth and death
04216 Ferroptosis
121549819 (tfr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121549819 (tfr1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121549819 (tfr1b)
04090 CD molecules [BR:
cclu04090
]
121549819 (tfr1b)
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
121549819 (tfr1b)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121549819 (tfr1b)
Exosomal proteins of colorectal cancer cells
121549819 (tfr1b)
CD molecules [BR:
cclu04090
]
Proteins
121549819 (tfr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
TFR_dimer
PA
Motif
Other DBs
NCBI-GeneID:
121549819
NCBI-ProteinID:
XP_041717658
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All DBs
Position
34:16835069..16850887
Genome browser
AA seq
764 aa
AA seq
DB search
MAATINQARSGLFKMFKSERYSSFTLQSDGERDGGSHLEVKLSDVIDDHAPSEQASQPGG
SHSYRPRPQRNYCKVCYLALGTLFIFIIGYLIGYVSHRSPRQEPIPCDSEQEVSVAEMAV
VDSALSWTDITSMLAQKLTPDAFNSRLSDVEQPDHAAGSIADNTLGEHVFKSFKNLEMEP
WTDIHYVQLQTLNSEKPNRVLIGQEELCQPKGYLAYSATGKVKGKAVYGNYGRQEDLMLL
LRTLKVELNGTVILLRATGQISLAQQVANVAALGVSAVLIYPDTKDYKLQTTERYGHVHL
GSGDPYTPGFPSFNHTQFPPTQSSGLPTVLAQSITAATAAKILTRIGGPEAPHSFIGELD
NVKYTLGGASSDDVTVEVNNVLQDTEIHNVFGVIKGFTEPDRYVVLGAQRDAWGPGYAKA
TVGTTLLLELARAVSEMVHTDGFRPRRSLVFASWSAGEYGSVGATEWLEGYLSSLDKRAF
TYISLDGVVTGKADVKVSASPLLYSLLQSTMKEVKNPIGFGESGKSLYDQVSGVNFEKAV
FEPMQMEDSAYPFLAFSGIPSLSFRFVSEKAYPYYGTSFDNKEYLGYATAHHLSSIATGA
GLVAGQLALRLVHDHVLRLDVQYYKTVLRQWVVKINQRLKQVTRNGSAEGLSANWLIKAI
GSYSTAADDLNIELLNTDFTDTLACHNINDRMMRVEHNLLSQFVSPKEVPFRHLLFGHGS
HTMAAMLEGEDREALRTQLALATWTLQGCANALSGDVWDIDNQI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaactattaatcaagccaggtcggggcttttcaaaatgtttaagagtgagcgg
tacagcagcttcactctgcagtcagatggagagagagacggagggagccacttggaggtg
aagctgtctgatgtcatagatgaccacgccccctctgagcaggcgagccaaccagggggc
tcgcactcctacaggccccgcccccagcggaactactgcaaagtgtgttacctggccctt
ggaaccctcttcatcttcatcatcggttatctgattggctatgtgagccaccgttctcct
cgccaggagccaatcccttgtgattctgagcaggaagtaagcgtggctgagatggctgta
gtagattccgctctatcctggaccgacatcaccagcatgctggcacagaaactgactcct
gacgccttcaacagcagactgagtgatgttgaacagccagatcacgcggcagggagcatt
gcagacaacacattgggagaacatgtgtttaaaagctttaagaatctggagatggagccc
tggactgacatacactatgtccaactacagacactcaacagtgagaagccaaaccgtgta
ctgattggccaagaggagttgtgccagcctaagggctatctggcctatagcgccacagga
aaagtgaagggcaaggcagtgtatggtaactatgggagacaggaggacttgatgctgctg
ctacggactctgaaggttgagctgaacggcaccgtgattctactgagagctacaggacag
atcagcctggcacagcaggtggctaatgtagccgcattgggagtatctgctgtgttgatt
taccccgacactaaagactacaagttacaaactactgaacgatacggacatgtccatcta
ggttctggagacccctatactcctgggttcccctccttcaaccacacccagttccctccc
acccagtcctctggtctgcccactgtactggcccaaagcattactgctgccactgctgcc
aagatactaacacgtataggtgggcctgaggctcctcacagttttataggcgaactggac
aatgtgaagtacaccctgggaggggccagtagtgatgatgtcacagtggaggtgaacaac
gtgttgcaggacacagagatccacaacgtctttggagtcatcaagggcttcactgagcca
gatcgatacgtggtactgggggctcagagggatgcgtggggtccaggctacgctaaagct
actgtcgggaccacactgctgctggagctggctagagctgtgtctgagatggtacacaca
gatggtttccgtcccaggaggagtctggtgtttgccagttggagtgcaggagagtacggc
agtgttggagctacagagtggctggagggttacctctcctctctggacaaaagagctttc
acctacatcagcctggacggcgtagtcactggaaaagctgatgttaaagtgtctgccagt
cccctgctctacagccttctgcaaagcaccatgaaagaggtgaagaatcccattggtttt
ggagagtctgggaagtctctgtatgatcaggtgtctggagtcaactttgagaaggcagtg
tttgagcccatgcagatggaagactctgcatatccgttcctggccttctctggaatcccc
tctctctccttccgcttcgtctctgagaaggcttacccttactacggcacctcttttgac
aacaaggaataccttggttacgccaccgcccatcatcttagttccatagccactggggcg
ggattggtcgcaggtcagttggcgttacgactggtccacgatcacgtgctgcgtctggac
gtgcaatactacaagacggttctcaggcaatgggtggtcaaaatcaaccagcgcctcaaa
caagtcacccggaatggttctgcggagggtctgtcagctaattggctcataaaggccatt
gggtcctacagtaccgctgctgatgacctcaacattgaactactcaacaccgacttcact
gacacactggcctgccacaacatcaacgaccgcatgatgagggtggaacacaacctcctc
tcacagtttgtctcccccaaggaggttccgttccgccacctgctgtttggccatggttcc
cacaccatggcagccatgttggaaggggaggacagggaggcactacggacccagctggcc
ctggccacctggactctacagggctgtgccaacgctctctctggagacgtctgggacatc
gacaaccagatctaa
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