Coregonus clupeaformis (lake whitefish): 121549861
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Entry
121549861 CDS
T08357
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121549861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121549861
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121549861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
121549861
NCBI-ProteinID:
XP_041717740
LinkDB
All DBs
Position
34:complement(14548815..14662390)
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AA seq
1947 aa
AA seq
DB search
MYEGKNTKNMFLTRALEKILADKEVKKSHHSQLRKACEVALEEIKEESEKLSPPPDSKSD
SSTLPPIKSKTSFVEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSGPDSTA
PGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNI
YLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKISWSLASRKRDRQLQEAKQMERE
RPRQHSPVTQQQEQEPDSPQLQQHTYPPAKGVPREANGPTTPSTPTPTSTPTTPTPILAP
QGRTAGPGDPQKGQGATEEEQGMVYESPDPDNGSEFSTTENHQTEAAAAQSAAQRDQETA
VEEEEPNYEEKAQEIVQSILQEVVNTIVGGHCLNPAHLCSDAKEPAGETEQPTEITEPAE
IITKVTEVTEVAEDEGALGSDSENVHANGIPGTPISASFTPSLPDDRLSVCSNDTQESGA
TTGPVPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQ
NAGPIFKTNEMFINAIKQYLCVALSKNGVSSIPKVFELSLSIFLTLLSHFKTHLKMQIEV
FFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQGVVDIYVNYDCDLNAANIFERLVND
LSKIAQGRAGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKP
SEQETNETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQG
IDLFNKKPKKGVQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYA
YVDQMDFQGKDFVYALRTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAY
VLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMK
ETKEITLKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRP
MFKLAWTPFLAAFSVGLQDCDDTEVAFLCLEGIRFAIRIACIFTIQLERDAYVQALARFT
LLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKAR
YISGTVRGKEGFITSTKEQSNDEYLGLAGGTVDRKQILSIQESIGETSSQSVVVAVDRIF
TGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWE
VIGDHFNKVGCNPNEDVAIFALDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRS
PTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHISTNVF
EKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFKDYTSDDM
NVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFR
IVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAISDVFTQYFESLSDVLLDDILAQLYWCV
QQDNEQLARSGTNCLENVVILNGEKFTPETWDKTCNCMLDIFKTTIPHALLTWRPAGAEG
DPMSPQDVSDKQLDSISQKSVDIQSHSEDPHSINSAERVAMETRRQSQYSVGMYEDGPRN
RTPTKIQEQRLFSALLIKCVVQLELIQTIDNMVFFPATSRKEDAENLAAAQRDALDTADV
LVETQDQGMYRYLTSEQLFKLLDCLLESHRFAKAFNANNEQRTTLWKAGFKGKSKPNLLK
QETSSLACGLRILFRMYADDSRQTASEEVQRRLLNVCSEAVAYFLTLTSESHRESWTNLL
LLFLTKVLKISDDRFKAHASRYYPLLCEIMQVDLIPELRSVLRKFYLRIGFVFQIAQLPD
TSQPEQEPEPGLEVEVERGKVAGEQAQ
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaaaaatacgaaaaacatgtttttaaccagagctttggagaagatccta
gccgacaaggaggttaaaaagtctcatcattcacaattgcgtaaagcctgcgaggtggca
cttgaggaaataaaggaggagtctgaaaaattaagtcctcctccagacagcaaatcagat
tccagcactcttccgccaatcaaatcaaagaccagcttcgtagaggccgacaagtatttc
ctgccgtttgagttggcatgtcagtccaaatgtccccgcatcgtcattacatcactagac
tgtttacagaagctgatagcgtacggccacctgacaggcagcggtccagacagcacggcc
cccggcaaaaagctcatcgacaggatcatcgagaccatctgtggctgcttccagggacca
cagacagatgagggggtgcagctacagatcattaaggccctgttgacggcggtgacctcc
cagcacatagagatccacgagggcacggtgctgcaggcggtcaggacctgctacaacatc
tacctagccagcaagaacctcatcaaccagaccacggccaaggccacgctcactcagatg
ctcaacgtcatcttcgcccgcatggagaaccaggcacttacaaatcacaagatatcttgg
tctctggcctcaagaaaacgtgaccgccagctccaggaggccaagcagatggagagggag
aggccccggcagcactccccagtcacccagcaacaggaacaggaaccggactcaccccag
ctccagcagcacacctaccccccagccaagggcgttcctcgggaggccaacggccccacc
accccctctacacccacacccacctccacccccaccactcctaccccaatcctggcccct
cagggcagaacagctgggcccggggatccccagaagggccagggggccacggaggaggag
caggggatggtgtatgagagcccggacccagataacggctctgagttcagcacaacagag
aaccatcagacagaggcagccgcagcacagagtgccgctcagcgagaccaagagacagca
gtagaggaggaggagcctaactatgaggagaaagcccaggagatcgtccagagcatccta
caggaagtcgtcaacaccatcgttggagggcactgcctgaaccctgcccatctgtgttca
gatgccaaggagcccgctggcgagactgagcagcccacagagatcacggaacccgctgag
atcatcaccaaggtaacggaggtcacagaggtggcagaagatgagggggcgctgggcagc
gacagcgagaacgtccatgccaacggaatccccggcactcccatctctgccagcttcacc
ccgtcgctgcccgacgacaggctgtctgtctgctccaatgatacacaggagtcgggggcg
accacaggccctgtaccaggtgctaagttctcccatattctccagaaggatgccttccta
gtgtttagatctctctgcaagctgtccatgaagcctctgtcagatggtcccccagaccca
aagtcccacgaactgcgctccaaagtgttatccctccagctgctcctatccatcctgcag
aacgctgggcccatcttcaagaccaatgagatgttcatcaatgccatcaagcagtacctg
tgtgtggcactgtccaaaaacggtgtctcctccatcccaaaggtcttcgagctctcgctc
tccatcttcctcaccctcctctcccacttcaaaacccacctcaagatgcagatcgaggtg
ttcttcaaggagattttcctgtacattctggagacatccacaagctcctacgaccataaa
tggatggtcatacagaccctcaccagaatatgtgcagatgcccagggtgtggtggatatc
tatgtgaattatgattgtgacttgaatgctgctaatatctttgagaggctggtgaatgac
ctctcaaagattgcacagggccgggcaggccacgagctcggcacaacaccactccaggag
ttgaccctgaggaagaaaggcctggagtgtctggtgtccatcctgaagtgtatggtagag
tggagtaaggaccagtatgtcaaccccaactcccagaccagccttggtcaggagaaaccc
tcggagcaggagaccaatgagacgaaggccccagagaccatcaaccgctacggaagcatc
aactccctggactccacggcctcgtcgggcatcgggagctacagcacacagatgtcaggg
acagacaaccctgagcagtttgaggttctcaaacaacagaaggagatcatcgagcagggc
atcgacctgttcaacaaaaaaccaaagaagggcgtccagtacctccaggagcaaggcatg
ctgggaaccaccccggaggacctcgctcagttcctgcaccaggaggagaggctggactcg
actcaggtgggcgagttcctgggggacaatgatcgcttcaataaagaggtcatgtatgcc
tacgtggaccagatggacttccaaggcaaggactttgtctacgctctcagaacgttcctc
gagggcttccgtctcccgggagaggctcagaagatcgacaggctcatggagaaattcgct
gctagatacctagaatgcaaccaggggcaaaccgagtttgcgagtgcagacactgcgtac
gtccttgcctactcaatcattatgttgacaacagaccttcatagtccgcaggtgaagaac
aagatgactaaagagcaatacatcaagatgaacagagggatcaacgacagcaaggatcta
ccggaggaatatctgtcggccatctacgacgagatcgcagggaagaagatcgctatgaag
gagaccaaggaaattactctcaaatccaacaagcacagtgtggccagtgagaagcagagg
cggctgctgtataacgtagagatggagcagatggctaagacagccaaggccctgatggag
gctgtcagccacgtccaggctcccttcaccagcgccacacacctggagcatgtcagaccc
atgttcaagctggcctggaccccgttcctagcagccttcagtgtgggcctccaggactgt
gatgacactgaggtggcttttctctgtctggagggaatacgctttgccatccggatagcc
tgcatctttaccatacagctggaacgggatgcgtatgtgcaggccctggcgcggttcacc
ctgctcacagccagctctggcatcactgagatgaagcagaagaacatcgacaccatcaag
accctcatcaccgtcgcccacacagacggaaactacctgggcaactcctggcacgagata
atgaagtgtatcagtcagttggagctggcccagctgatcgggacgggggtgaaggccagg
tacatctcagggacggttcgggggaaagagggcttcatcaccagcaccaaggagcagagc
aacgacgaatacctgggcctggcaggtgggacagtagaccggaagcagatcctcagtatc
caggagtccataggagaaaccagctcccagagtgtggtggtggctgtggacagaatattc
acaggttctaccagactggatggtaatgcaattgtggactttgtgcgctggttgtgtgct
gtgtctatggatgagctggcctcgcccacacacccccgcatgttcagcctgcagaagata
gtggagatctcctactacaacatgggacgtatcagactgcagtggtccaggatctgggag
gtcattggagaccacttcaacaaggttggatgcaaccccaatgaggacgtggctatcttt
gctttggattctctccggcagctgtccatgaagtttctagagaagggagagctggcaaac
ttcagattccagaaggactttctgaggcctttcgagcacatcatgaaaaagaacagatct
ccaacaatcagggacatggtggtgcgctgtatagcccagatggtcaactcacaggcggga
aacatccggtcgggctggaagaacatcttctcagtgttccacctggctgcctcggaccag
gacgagagcatcgtagagctagcattccagaccacagggcacatctccacgaatgtattt
gagaagcacttcccagccaccatagactccttccaggatgcagtcaagtgtctatctgag
ttcgcctgcaacgcctccttccccgacaccagcatggaggccatccgcctcatccgacac
tgcgccaaatacgtctctgacaggccccaggcgttcaaagactacaccagcgatgacatg
aatgtagccccagaggaccgggtgtgggtgagggggtggttccccatcctctttgagctg
tcctgcatcatcaacaggtgtaaactggacgtcaggaccaggggtctgacggtgatgttt
gaggtgatgaagacctatggacacaccttcgagaaacactggtggcaggatctgttcaga
atcgtcttcaggatctttgacaacatgaagctacctgagcaacaaactgagaaagcagag
tggatgacgacgacctgtaaccacgcactttacgccatctctgacgtgttcacgcagtac
tttgagtcgctcagtgacgtcctgctggatgacatcctggcccagctgtactggtgtgtt
cagcaagataatgagcagttggcccggtcaggcacaaactgtctggagaatgtggtcatc
ctgaatggagagaagtttactccggagacctgggacaagacctgtaactgcatgctggac
atcttcaagaccaccatcccacacgcgctgttgacatggagaccggcaggagcagaggga
gatcccatgtcaccacaggacgtatcagacaaacagctggactcaatttcccagaagtca
gtggacatccagtcccattccgaagacccgcattccatcaacagtgcagagagggttgcc
atggagacccggcggcagagtcagtacagcgtaggcatgtatgaggacggccccagaaac
aggaccccaacaaagatccaggagcagaggttattttcagccctgctcattaagtgtgtg
gtgcagttggagctgatccagaccatagacaacatggtcttcttccctgcaaccagtagg
aaggaggatgctgagaacctggctgctgcacagagagatgctctggacacagcagatgta
cttgtggagacccaggaccagggaatgtaccgctacctgacctcagaacagctgttcaag
ctgctagactgcctgctggagtcccaccgcttcgccaaagccttcaacgccaacaatgag
cagaggaccactctctggaaggcaggttttaaagggaagtcgaagcccaatctgctgaag
caggagaccagcagtctggcgtgtggcctgaggatcctgttccggatgtacgctgacgac
agccgtcagactgcctcggaggaggtccagagacggctgctcaatgtgtgcagtgaggca
gtagcctacttcctgactctaacatcagagagccacagagaatcctggaccaacctgctc
ctcctcttcctcaccaaggtcctgaagatcagtgacgacaggttcaaggcccatgcgtcc
aggtactaccctctgctgtgtgagatcatgcaggttgatcttatcccagaactgcggtcc
gtactgcggaagttctacctacgcatcgggttcgtgttccagatcgcccagctacctgac
acatcccagccagaacaggaaccagaaccagggcttgaagtggaggtggagagagggaag
gtggctggagagcaagcccagtga
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