Coregonus clupeaformis (lake whitefish): 121549870
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Entry
121549870 CDS
T08357
Name
(RefSeq) ras-responsive element-binding protein 1-like isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121549870
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121549870
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
121549870
NCBI-ProteinID:
XP_041717756
LinkDB
All DBs
Position
34:14900402..14967583
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AA seq
1854 aa
AA seq
DB search
MSRRKQPNPNKVELMESATEDKRPGGGVSAELSAGETPDSTHTQDKHTASNGAMEEEEDA
AVENGENMTEEGGVDLSSINTMMSTVMSAGQLNGALEPSSAPASTPSTPIGKTTPPRPPS
VNRNARRNTTEAKDINTDFICPLCDKDCMTQHQLTMHIRQHNSDNGATDHSCSICGKALS
SASSLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVVPISPPSPTKRRR
PSAKRRSAMDEDKERGNEPANKKVLEETVLEELGSGQGDDDVLPCPICFNTFGCKYDLEV
HMDTHPDTTLRCDLCCLSFRTHRGLLRHNAGIHKQLPTDHGGRPFIQNNPSIPSGFNDLA
FIDFSCCKFPHIAQVWCETNLRRCTSKFHRFVCEACDKGFPLHSALDLHKKTCTMHQQQQ
PSPTGGAQEKPATLAPQQASFLESLGLQHISQVKVQPSADEVQQAQLDSIRVIQVEPPAS
TQPQEADSAAAGFLGGLGLVAASSLASSLQGLSQREALSLLSLQPLPTGFLFHPGGGASV
KPVFGESGLMELADIQQILKVTSAAPGQMGLLPPLAKAPHWGVSGQGQAAGCKPMPPLKP
KPMVAPRSSLAASTPPPLQSTQQASLGCISPSLPPPASQLLKMPRESSSSSSSSSSSSSS
SGSQASLEKMQMEADCMGDAHVPNDSTELQIKQEEGQAARGKKGAGGANRGGVKASYPCR
FCDQVFVYSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRVCHY
PFTVKANCERHLRKKHMKNTRKEIEKNIKYVSSTTTQDPLEQASAGDTACRFCGEELKTY
RALQIHLRTHNGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLPAI
TATTSRASPSSPLALNGLTPTPTATLQPVKVEDLSIYSSSGDSDQPLDFSNKSRGVGGTS
SGAGSLAGSPGIKLETVSPAAYDCSMEPIDLSIPKNPNKRLKRDATTVDPVSVERREIKK
ELPFPSLLDHLALAQALQLDKSYEEKLKTAQSGSYQLPPVTHSTLLISTPTGTGRALRLK
PLLPKPTSSSSSLKEIPPLASIAQIISSVSTAPDLLKREPTPDIKAGAGLNGLQTEPERL
VGGDNSSEASMEEVPLEGSSRKRTRKKPVSQDKTMAPARVPMPEQNTDSGMDLESSGEFA
SVEKMLATTDANKFSTYLRTGAAELGRRDEGRQSPGEEKEEKESPPQSVPPQSKGGKKNA
YSNSVQKMTCPFCPRVFPWASSLQRHMLTHTVFSNVLSATGQKPFPCPKCDAFFSTKSNC
ERHLLRKHGVTNRSLRRNGQMSKNKDGDEGSHDSAESSENEQTAGEALDLSSMDPDQKSS
ASESPSADQTPDTAELLLGEMEPQPNNIENDDNDDSQSNKSLDLNFASKLIDFKFSSEGE
QPQTSLVGEKVVAVAEPERVTDAQQQQDQEPPKYTCKSCKKNFRYAATLARHEKAHLCES
APPEEACGTEEIRPATEELPNTTTATTLEEDQEEGEKDAPESEGAGSVMDSGSEEEEEKK
EERSDEDGGSAEPKIEGEAGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPY
KCQTCERTFTLKHSLVRHQRIHLKPRGSEGAEEADANGAEAPAGDSASEEGECTPTSTCP
PSENESESTGGAREEGGEGTEKEAPLPGPIFQAQSLSTTEPAQSESATEAIAEPLVEPVT
EADSEPASEPVSESVPDPSVEQSSDGPSETAVELDAEVSASEMARETDDNAATQPPTETP
KESSTESPAPQPTTPEKDPDGPSEGFIQGLLEIHTKPSLEHILPAGEAPLVGVE
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgcaagcagcccaaccccaacaaagtcgaactgatggagagcgccacagag
gacaagcgtccggggggaggagtgagcgccgagctgagcgctggagagacccccgactcc
acacacacacaggacaaacacacagcgagtaacggagcgatggaggaggaggaagacgct
gcggtagaaaatggagagaatatgacagaggaggggggcgtggacttgtcgtccatcaac
accatgatgtcgacggtgatgagcgcaggccagctcaacggagccctggagccctcctca
gcccccgcttccacaccctccacccccatcggcaagaccaccccacccagaccccctagt
gtcaaccgcaacgcccggaggaacacgacggaagccaaagacatcaatacagatttcatc
tgtcccctgtgtgacaaggactgtatgacccagcaccagctcactatgcacatccgacag
cacaactcggacaacggggcgacggaccactcatgcagcatctgtggcaaggccctgagc
tcagccagctcgctggaccgccacatgctagtgcacagcggagagaggccctacaagtgc
tccttctgcggacagactttcaccaccaacggcaacatgcacagacatatgaagatccat
gacaaagacccggccggcgtcgttcccatcagccccccctcgcccaccaagagacgccgc
ccctctgccaagaggaggtcagccatggacgaggacaaggagcgaggcaatgaaccggcc
aacaaaaaggtgctggaggagactgtgttggaggagttgggttcaggccagggggatgat
gatgtgttgccgtgtcctatctgcttcaacacctttggctgcaagtacgacctggaagtc
cacatggacacacaccccgacaccacgctcaggtgtgacctgtgctgcctctccttccgg
acccatcgcggccttctgcggcacaatgctggcatccacaagcagctgcccacagaccac
ggcggacggcccttcatccagaacaacccctccatcccctctggcttcaacgacctggcc
ttcatcgacttctcctgctgcaagtttcctcacatcgcccaggtatggtgtgagaccaac
ctccgccggtgcaccagcaagttccaccgctttgtgtgtgaagcatgcgacaaaggattc
cccctgcactcggccctggacctgcacaagaagacctgcaccatgcatcagcagcagcag
ccgtcacccacagggggcgcccaggagaagccagcaaccctggcccctcagcaggccagc
ttcctggagtccctgggtctgcagcacatctcccaggtcaaggttcagccttcggcggat
gaggtccagcaagcccagctggacagcatccgggtcatccaggtggagcctccggcctcc
acccagccacaggaggcggattctgcggctgcgggtttcctcggcggcctgggcttggtg
gcggcctcgtccctggcctcgtccctgcagggcctgtcccagagggaagccctcagcctg
ctctccctgcagcccttacccacaggcttcctcttccacccgggcggtggtgcttcggtc
aagcctgtgtttggcgagtctggcctgatggagctggctgacatccagcagatcctgaag
gtgacctcggccgcccccggtcagatgggcctcctgccgcccctggccaaggctccccac
tggggagtgtccggccagggccaggcagccggctgcaagcccatgcccccactgaagcca
aagcccatggtggcaccgcgctccagcctggctgcctccacgcctccgccgctccagagc
acccagcaggcctccttgggctgcatcagccccagcctgcccccgccggccagccagctg
ctcaagatgcccagagaatcttcgtcatcttcatcgtcgtcgtcatcgtcctcctcttcc
tcgggcagccaggcctccctggagaagatgcagatggaggcggactgcatgggcgacgcc
catgtgcccaacgactcgacagagctgcagatcaaacaagaggagggccaggcggccagg
gggaagaagggggcagggggtgccaaccgcgggggcgtcaaggcctcctacccctgccgc
ttctgcgaccaggtgtttgtttactccggggtgctgcaggcgcacatgcgcttccacctg
ggcatcctgccgcaccagtgcaacatctgtgactacgtggcgcccgacaaggccaccctt
atccgccacctgcgcacacacagcggcgagcgcccctacgtctgccgcgtctgccactac
cctttcaccgtcaaggccaactgtgagcgccacctgcgcaagaagcacatgaagaacacg
aggaaagagatcgagaagaacatcaagtatgtctcgtcgaccaccacccaggatcccttg
gagcaggcttccgccggcgacactgcctgccgcttttgtggtgaggagctaaagacctac
cgggctctccagatccacctgcgcacccacaacggctgccagcgcaagccctttgagtgc
cggcgctgcggggcggctttcctggccaagaggaactgcatccaccacatgctcaagcag
caccctgaggtgcaggagcgggagatcgaggagcacatcgccacccttctccccgccatc
acagccaccacctccagggccagccccagcagccctctggctctcaacggcctcacgccc
acccccactgccaccctgcagccggtcaaggtggaggatctcagcatctactcctcctct
ggtgactcggatcagcccttggacttctccaacaagagccggggggtgggtgggaccagc
agcggtgcagggagcctagccggttctcctgggatcaaactggagacggtcagcccggca
gcctacgactgctccatggaacctattgacctgtccatccccaagaaccctaacaagagg
ctgaagagagacgccaccactgttgacccggtgagcgtggagcgccgagagatcaaaaag
gagctgcccttccccagcttactggaccacctcgccttagcccaggctcttcagctggac
aagagctatgaggagaagctgaagactgcccagtctggctcttaccagctccccccagtg
acccactctacactgctcattagcacccctactggcacaggccgggcgctccgtctcaag
cccctgctgcccaaaccgacctcttcttcctcctccctgaaagagattcctcctctggct
tccatcgcccagatcatctcctccgtctcaacggctccagacttgctcaagagggagccc
acgccggatataaaggctggcgccggcctcaacggcctccagacagaaccggagcgtcta
gttgggggcgacaacagctctgaagcctcgatggaagaggtccccctagaaggatcatcc
agaaagcgcactaggaagaagccagtgagccaggacaagactatggcacctgcccgtgtg
cccatgcctgagcagaacacagacagcggcatggacctggagtccagcggggagtttgcc
agcgtggagaagatgctagccaccaccgacgctaacaagttcagcacctacctgcggacg
ggggcggcggagcttggaaggagggacgaggggagacagagcccgggagaggagaaggag
gagaaagagtcgcctcctcagtctgtgccgccccagtccaaaggagggaagaagaatgcc
tactccaactcagtgcagaagatgacctgtcccttctgtccccgggtcttcccctgggcc
agctccctgcagaggcacatgctcacacacacagtcttctctaatgtgctgtcggctaca
ggtcagaagcccttcccctgtcccaaatgtgacgccttcttctccaccaagtccaactgt
gagcgccacctgctgcgcaagcacggcgtgaccaaccgctcgctgcgccgcaacggccaa
atgtccaagaacaaggacggcgacgagggttcacacgacagtgctgagagttctgagaat
gagcagactgcaggggaggctctggacctgagcagcatggaccccgatcagaaaagctct
gcatccgagtcgcccagcgcagaccaaacaccagacactgctgagctgctgctaggggag
atggaaccgcaacccaacaacattgaaaatgacgacaacgacgattcgcagagcaacaag
agcttggacctcaacttcgccagcaagctcatcgacttcaagttctcttcggaaggcgag
cagccccagacctctctggtcggagagaaggtggtagcggtggccgagccggagagagtg
acggacgcccagcagcagcaggaccaagagccccccaagtacacctgcaagagctgcaag
aaaaacttccgctacgccgccaccctggctcgccacgagaaggcacacttgtgtgagagt
gcaccccccgaagaggcttgtggaacagaggagattaggcccgccacagaggagctcccc
aacactactacagccaccaccttggaggaggatcaggaggagggagagaaggatgctccg
gaaagcgagggagcgggcagcgtgatggacagcggttcagaggaggaggaggagaagaag
gaggagagaagtgacgaggacgggggctcagcagaaccaaagattgaaggagaggcgggt
agagggtcggggagcaaggcagacaagaggaagaagatctgtaacgtgtgcagcaaacgc
ttctggtcactgcaggatctgacgagacacatgcgttcgcacacaggtgagaggccctac
aagtgccagacgtgcgagcgcaccttcaccctgaagcacagcctggtgaggcaccagcgg
atccacctgaagccacggggtagcgagggggcagaagaagctgatgccaacggggcagag
gccccggccggagactcagctagtgaggagggagagtgcacccccaccagcacctgcccc
ccttcagagaacgagagcgaaagcaccggaggggccagggaggagggaggcgagggaact
gagaaagaggcccctctgccgggccccatattccaggcccagtccctgtccaccactgaa
ccagcccagtcagagtccgctacagaggccattgctgagccgctcgttgagccagtcacg
gaagcagactcggaaccggcctcggaaccagtctctgaatccgttcctgacccatctgta
gaacaatcctcagacggcccctctgaaacagctgtagaactagacgctgaggtatcagcc
tctgaaatggctagagaaacagatgacaatgcagccactcaaccgccaacagaaaccccc
aaagaatcttccacagagtccccagccccacagcccactaccccagagaaagaccccgat
ggcccctcggaaggcttcatccaaggcctactggagatccacaccaagccttccctggag
cacatcctacccgctggcgaagctcccttggtgggcgttgagtga
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