Coregonus clupeaformis (lake whitefish): 121549926
Help
Entry
121549926 CDS
T08357
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121549926 (trdmt1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
121549926 (trdmt1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121549926 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
121549926
NCBI-ProteinID:
XP_041717848
LinkDB
All DBs
Position
34:1440526..1453100
Genome browser
AA seq
387 aa
AA seq
DB search
MEHLRVLELYSGIGGMHYALTESGVAAEVVAAVDVNTTANEIYKHNFPNTPLLPKTIEGM
TLDDFNKLAFDMILMSPPCQPFTRIGLQGDITDPRTKSFLYILDLLPRLSKLPRFILLEN
VKGFETSSARDSLVKTLKECGYNYQELMVSPTCLGMPNSRLRYFMIAKAPPGSFSFHTTS
AIQEGFPHPADKVLLEPSSPISPSPTTTTCQKDDHKEDEGGILYKLERAQDAERKSSQNR
DPSLRQIRAYLEDQGEGEMEQYLLPPKTLLRYALLMDIVRPICRRSVCFTKGYGHYVEGT
GSVLQSCMETDLEAAFKSLERLSDEEKLQQLSRLKLRYFSPREIANLMGFPKHFNIPKNI
STKQQYRVLGNSLNVHVVARLIELLVS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaacatctcagagtactagaattgtacagcggtatcggaggaatgcattatgcatta
acagagagtggtgtggcagcagaggtggtagctgcagtggatgtgaacaccacagccaat
gagatctacaaacacaacttccccaacacgcctttacttcccaagaccatagagggaatg
acattggatgatttcaacaaattggcgtttgatatgatcttgatgagccctccatgtcaa
cctttcactaggattgggttacaaggtgacataactgaccccagaaccaagagctttctc
tacatccttgaccttctaccaaggctcagcaagttgccgcgcttcattctgctggagaac
gtgaaaggctttgagacgtcctccgccagggactctttggtgaaaacgctaaaggaatgt
ggatataactatcaggagctcatggtttctcctacatgtctggggatgcctaactccaga
ctccggtatttcatgattgccaaagcaccaccaggatctttctccttccacaccacttca
gcgatccaggaaggtttcccgcaccctgcagacaaggtcttattagagcccagttctcca
atctcacctagtcccactacaaccacctgccaaaaggacgatcacaaggaagatgaaggt
ggtatcctgtacaagctggagcgggcccaggatgctgagaggaagagcagtcagaacaga
gacccgtccctcagacagatcagggcctacctggaggaccagggagaaggggagatggag
cagtacctccttcctcctaagaccttgctgcgctacgctctgctcatggatatagtcagg
cccatctgcaggagatctgtctgcttcaccaaaggctatggacactacgttgagggaaca
ggctctgtgcttcagtcctgtatggaaacagatttggaagcagcgtttaaatctctggag
cgtctgtctgatgaggagaaactacagcagctgtccaggttgaagctccgctacttctcc
cctagagagatagccaacctcatgggcttccccaagcacttcaatatcccaaagaacatc
tccaccaagcagcagtaccgagtcctggggaatagcctgaacgtacatgtggttgcccgg
ctcatagaactcttggtatcctaa
DBGET
integrated database retrieval system
