Coregonus clupeaformis (lake whitefish): 121549945 Help Entry 121549945         CDS       T08357                                  Name (RefSeq) integrin beta-1-like isoform X1   KO K05719   integrin beta 1 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03271   Virion - Rotavirus cclu04145   Phagosome cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04514   Cell adhesion molecules cclu04530   Tight junction cclu04810   Regulation of actin cytoskeleton cclu04820   Cytoskeleton in muscle cells cclu05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03271 Virion - Rotavirus     121549945  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121549945    04514 Cell adhesion molecules     121549945  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     121549945   09144 Cellular community - eukaryotes    04510 Focal adhesion     121549945    04530 Tight junction     121549945   09142 Cell motility    04820 Cytoskeleton in muscle cells     121549945    04810 Regulation of actin cytoskeleton     121549945  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     121549945  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cclu04131]     121549945   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121549945    04515 Cell adhesion molecules [BR:cclu04515]     121549945    04090 CD molecules [BR:cclu04090]     121549945 Membrane trafficking [BR:cclu04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     121549945 Exosome [BR:cclu04147]  Exosomal proteins   Proteins found in most exosomes    121549945 Cell adhesion molecules [BR:cclu04515]  Integrins   Integrin beta subunits    121549945 CD molecules [BR:cclu04090]  Proteins   121549945 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin Motif Other DBs NCBI-GeneID:  121549945 NCBI-ProteinID:  XP_045066446 LinkDB All DBs Position 34:21272366..21309032 Genome browser AA seq 806 aa AA seqDB search MYADKMDLKLLLISALLGVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCMDPEFLK QGEATSTHCDELESLRKRGCSAAKVENPRGSQRILKNKAVTNRNKGAENLRPEDITQIQP QKLTLSLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMVEMSKI TTDFKIGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLV GQQQISGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP NDGKCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYKELKNLIPKSA VGTLSANSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVTGEGEMGRKCS NISIGDEVSFTISITAKQCPKMGKPETIKIKPLGFTEEVEIALNFICECDCHKDGIENSE ICHKGNGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKNCRKDNGTDICSNNGDCVCGT CECKKRENPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANWTGSACDCSLD TTTCLASNKQICNGRGTCECGTCKCTDAKFQGPTCEICPTCPGVCTEHKECVQCRAFGTG EKKDTCKRDCSYFNLIKVKDRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNKTEKEVH VVETLDCPAGPDIIPIVAGVVAGIVLIGLTLLLIWKLLMIIHDRREFAKFEKEKMNAKWD TQENPIYKSPINKFQNPNYGHKAVVL NT seq 2421 nt NT seq  +upstreamnt  +downstreamnt atgtacgccgataagatggacctgaaactacttctgatatcagcgttgttaggagtcatt tgttacagcagtgctcagcaagaagggaacgagtgcatcaaggctaatgccaaatcctgt ggggagtgtattcaagtgggagcgaaatgtggctggtgcatggacccagagttcctgaag cagggtgaggccacatcgacccactgtgatgagctggagtccctgaggaagagaggttgc agcgccgccaaggtagaaaaccccagaggcagccagcggatcctgaagaacaaggctgtg accaaccgcaacaagggagcagagaatctcagaccagaggacatcacacagatccagcca cagaaactcaccctcagcctcagatctggtgaaccccagtcttttaacctgaagttcaaa cgggctgaggattaccccatcgacctctactacctgatggacctgtcctactccatgaag gacgatctggaaaacgtcaagaacctgggaacacagctgatggtggagatgtcaaagatc acgactgattttaaaatcggttttggttcctttgtagagaagacggtgatgccttacatt agcaccaccccagccaagctgctgaacccctgtacaggggaccagaactgcaccagtccc ttcagctataagaacgtcctgaagctgaccagcaatggacaggagttcaacaccctggtg ggacaacagcagatctctggaaacctggactcaccagagggaggcttcgatgccatcatg caagtggctgtgtgtggtgagcacattggctggaggaatgtcacccgtctgctggtgttc tccactgatgctggcttccacttcgctggagatgggaaactgggagggatcgttctgccc aacgatgggaaatgtcacctggagaacaacatgtacacaatgagccactactatgactac ccctccattgctcacctggttcagaaactgagcgacaacaacatccagacgatctttgcc atcacagaggagttccagcctgtttacaaggagttaaagaatctcattcctaagtctgcg gtggggacactctctgctaactccagcaatgttatcaacctcattattgatgcctacaat tctctttcctcagaggtgattctggagaacagcaagcttccagagggagtgaccataacg taccagtcacgctgcaagaacggagtaactggtgagggagagatgggaagaaaatgttcc aatatctccatcggggacgaggtttctttcacaataagcatcacagctaagcagtgtcct aagatgggcaaaccagagaccatcaagatcaagcccctagggttcactgaggaggtggag atcgctctgaacttcatctgcgagtgtgactgtcacaaagatggcattgagaacagtgag atctgccacaaaggcaacgggacatatgaatgtggagcctgcaggtgcaatgagggccgt attggtagacagtgtgagtgcagcaccaacgaggtgaccagcgaagacctggataagaac tgccgtaaagacaacggtacagacatctgcagcaacaacggagactgtgtgtgtggaacc tgtgagtgtaagaagagagagaaccccgaggaacgctacagcgggaagttctgcgagtgt gacaacttcaactgtgaccgctccaacaacaaactctgtggaggacatggtcgctgtgag tgcagggtgtgtatctgtgatgccaactggacaggcagtgcctgtgactgttctctggac accacgacctgcctggcctccaacaagcagatctgtaatggacgaggcacctgtgagtgt ggcacctgcaagtgcactgatgcaaagttccagggtcccacctgtgagatctgtcccacc tgtccaggggtctgcacagaacacaaggagtgtgttcagtgcagggcctttgggacgggg gagaagaaggacacgtgtaagagagactgtagctacttcaacctgatcaaggtgaaggac agagacaagctgcctcagccaggacaggccttccccctgatgcactgtaaggagagggat gccaatgactgctggttctactacacctacgctgtcaacaagacagagaaggaggtccat gtggtggaaacactagactgccctgcaggtcctgacatcatccccatcgtggctggcgtg gtggcgggcatcgtgctgatcggcctgaccttgcttctcatctggaagctgctcatgatc atccacgacaggagagagttcgccaagtttgagaaggagaagatgaatgctaaatgggac acgcaagagaatcccatttacaagagccctattaataagttccagaatccgaactatgga cataaagctgtggttctataa

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