Coregonus clupeaformis (lake whitefish): 121549957
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Entry
121549957 CDS
T08357
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04520
Adherens junction
cclu04916
Melanogenesis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121549957
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121549957
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121549957
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121549957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121549957
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121549957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121549957
NCBI-ProteinID:
XP_041717951
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENLSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVNHGSLQSRQALKDARSPSPAHIVGPFCLEFPGQSDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQGDVDPKTGIPRPPQHPDISPYY
PLSPGAVGQIPHPLGWLVPQQGQPVYQGFRHPYPTALTVNASMQSFLSSRFPHHMVPPHH
SLHQTGIPHPAIVTPNVKQESSHSDIGLNSSTILYTLHRKHQDSKKEEEKKKQPHIKKPL
NAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLY
PGWSARDNYAANQQGKKKKRKRDKQPGEGNEHREYFPNPCLSLPPITDLSAPKKCRARFG
LDQQNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLLDSPHPPPSSVAPSPSSKESRPQ
TEQMQPLSLTMKPAHQPLHHPHRHLLAGHPPPPSLVLLENSAAAAGKTPGAAHNGAHGDV
SSSRQPGSSGAVLARPLAASLCHSHSLHPNSTAPQPLSLVTKSIE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgatttgggtgcgaacgatgaaatgatttcc
ttcaaagatgaaggggagcaggaggaaaagatttcggagaatttatcggcagaaagggat
ttagcagatgtcaaatcttctcttgtaaatgaatcagaaacaaatcaaaacagctcgtcg
gattcggaggcggaaagacggcctccgcctagatctgaaactttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgatccccgatcttacaagcccgtaccttccgaatggatca
ctttctccaacagcacgcacatacctacagatgaaatggcccctgctagatgttaaccac
ggaagtcttcaaagtagacaagcacttaaagatgcccggtccccgtcaccggcacacatc
gttgggcccttctgcttggaattccccggacagtcagatctgagccttcaccaatttcag
ttgtctaataaggtcccagtggtacagcaccctcaccatgtgcacccgctcacgcctctg
atcacctacagcaatgagcacttcacaccgggcaacccccctccgcacctacagggagat
gtggaccccaaaacaggaattccaaggcctccacaacacccagacatatccccctattac
cctctctcgcctggcgctgtaggccagatccctcatccgctggggtggttagtaccacag
caaggtcaacctgtttaccagggttttagacacccctacccgactgcgctcactgtcaac
gcatccatgcaaagttttctgtcctccaggttccctcaccacatggtcccccctcaccac
agtttgcaccagaccggcatcccccaccccgccatcgtcacgcccaacgtcaagcaagag
tcctcccacagcgacataggcctcaacagctctactatactgtacacactccacaggaaa
caccaggactccaaaaaggaagaggagaagaagaagcagccccacatcaagaagccgctg
aatgcctttatgctctacatgaaggagatgagggccaaggtggtggccgagtgcacgttg
aaagagagcgccgccattaaccagatactgggacgaaggtggcacgccctaacacgagag
gagcaggcgaaatactacgagctggccaggaaagagcgacagcttcacatgcagctctac
cccggctggtcagcacgagataactatgcggctaaccaacagggcaagaagaagaagagg
aaaagggataagcagccaggagagggcaatgaacacagagaatattttccaaacccttgc
ctttcactccctccgattacagacctgagcgctcctaagaagtgtcgagcgcgctttggg
ctcgatcagcagaataactggtgtggcccgtgcaggagaaaaaaaaagtgcattcgctac
atccaaggtgaaggtagctgtgccagtcctccctcttcggacggaagcttactagactcc
ccccaccctcccccctcctcggtggccccctccccctcctcgaaagagtccagacctcag
actgaacaaatgcaacctctctcactgactatgaaaccggcccaccagcctctccaccac
cctcaccggcaccttctggctgggcatcctcctccgccatctttggttctgctggaaaac
tctgctgctgcagcgggcaaaacgcctggcgcagcccacaacggagcccacggcgacgtc
tcgtcctcgcggcagccgggctcctcaggcgccgtcctggccaggcccttggcagcatcg
ctgtgtcattcccactcgctacaccccaactccacggcccctcagcctctgtcgctcgtt
accaagtctatagagtag
DBGET
integrated database retrieval system
