Coregonus clupeaformis (lake whitefish): 121549964
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Entry
121549964 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF152
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121549964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121549964
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121549964
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121549964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121549964
NCBI-ProteinID:
XP_041717926
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All DBs
Position
34:complement(27833312..27909441)
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AA seq
210 aa
AA seq
DB search
METRSLSQDSILECQICFNYYSPRRRPKLLDCRHTCCSVCLTQMRSSQKEIRCPWCRGVT
KLPAGLSVSHLPDDPDIITVIAIPHASEHTPVFIRLPSNGCYMLPLPIAKERALLPGELG
CRFLPGGSGQQKVDVAVVAMPELQPLGMSLDSLEEAERRGAGGGGGGGKGSTWSGVCTVI
LVACVLLFLLGIVLHNMSCISKRFTVISCG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggagactcggtctctctcgcaggactccatcttggagtgtcagatctgttttaactac
tacagcccgcgacggaggcccaagctgctggactgcagacacacgtgctgctccgtgtgc
ctgacccagatgaggtccagccagaaagagatccgctgcccctggtgccgtggcgtcacc
aaacttcccgccggcctctccgtctcccatctccccgatgaccccgacatcatcaccgtc
atcgcaatcccgcacgcctccgagcacacgcccgtcttcatccgcctgcctagcaatggc
tgctacatgctgcccctgcccatcgctaaggaaagggcactgttgcccggcgaactgggc
tgccggttcctgccaggtggcagcgggcagcagaaggtagatgtggcagtggtggccatg
cctgagctgcaacccctggggatgagtctcgacagcctggaggaggcagagaggagggga
gccgggggaggtggtggtggagggaagggctccacgtggtccggggtgtgtacagtgatc
ctggtagcctgcgtcctgctctttctcctgggaatcgtgctccacaacatgtcctgcatc
tccaaacgctttactgtcatctcctgtggctga
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