Coregonus clupeaformis (lake whitefish): 121549988
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Entry
121549988 CDS
T08357
Name
(RefSeq) condensin-2 complex subunit G2-like
KO
K11492
condensin-2 complex subunit G2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121549988
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
121549988
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Gene cluster
GFIT
Motif
Pfam:
Condensin2nSMC
HEAT
VPS15-like_hel
PDS5
HEAT_2
Cnd1
CLASP_N
HEAT_GCN1_C
HEAT_EZ
TPR_TRIP12_N
ARM_TBCD_2nd
TIP120
Motif
Other DBs
NCBI-GeneID:
121549988
NCBI-ProteinID:
XP_041717964
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Position
34:29243315..29266013
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AA seq
1143 aa
AA seq
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MSKREAFLDSVCKDNVGEFLNFIKLHKDTAEPFDLDEVLQELPKGQREALWARLVTVLCD
QLAAFAPEHWDAGLEEDKEDNDMEVEVSPDRTHTMSVFEGVTLVVTASVDVIEGGDTYNS
LLECTNILHGVLPYLPASEMPLRHAITGLCEAWWKKGLLGKEELGRTAFLVCLEKTLILK
KPGAEIQRLWGFHEVLLTVDFASESSQELIDLLLQCFLSVNHIRNEDGKRLMVFLFSWNV
NFIRMIHGTIKNQLPYFANSLTDNIAEIYCRAWKKASGVCLEQIESTCIQDFMQHAVLLH
RTSPVHAKVRQILSYFHKRKGRHGLDEMLYRLYKPILWRALSAANSEVRANATLLFTEAF
PIHDPSQSSEKMDETIQKQLDTLVCLLEDPQPLVRSTATLGVCKILAKCWEVIPPTVITD
FLKKLVVELANDTSSPDVRCSVFKCLTIVLDNGQSHPLLEQLLPALKNSLHDTSEKVRVA
FLDMLLKIKAVRAAKFWKVSSMEHLLARLAVDSQPVSKRIVNLLFNSFFPVNQSEEVWCE
RCVTLIQMNPKAARKFYQYAHIYTAPTNIVKLMLIIRRCLNACIQTEDLNETNSNNKENT
SVLEDVLSVKDTASMASLLEVVVILWRSIRKALQLNKDALQYTTVKFGSVVPKYFNVFQE
ERCTVPLIQLASLLPPASVPTFSCGVLSRLKRLEAGAKVSQYSQIIECLCSWGQAAHVLE
LVTDWLTDALPTAAGKGNTSRKVRIQETVEAKPDLGLDYLEYLVSRTSTRDCILPFRQGQ
LKQLHKALGAWKSVLLSHLSSSETQANIPRAETALRAFALHARLSAHLQHKFSEGRDFLV
PVENMAVWVAERVLPFLVSPSEGGVTEQQRDLARQVVESLLMVCRDVIRVGLGDEEFKGQ
ILHLCSIVLLSEKGYLCVPLLFFVLTEVAENYVPENQAQDDQSSIILSVVTNVFQKILEV
MARRLRKDPEEGQELWYSAVPALGDFLQVVQAWSGVDSNPLNGVFSTICAATLAATQHSL
QKISHPQEVTTPETVQDLPPLSSILLDVLLKSPPVTRAFLAEINSTVDSEVIDGLTGLAA
VLHILAVVRQTGKFKEDLKSTAVSVQRQLQKHYAVKAENEGHIQRVIYESAINTLNEILM
PCP
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgagaggcatttttagactccgtctgcaaagacaatgtgggggaatttctc
aatttcattaaactccataaggacacagctgagccctttgacctggatgaggtcctgcag
gagttgccaaagggccagagagaggcactgtgggccagactagtcacagtactttgtgac
cagctggcagcctttgcaccagagcactgggatgctggcttagaggaggacaaggaggac
aatgacatggaggtggaggtgtccccagaccggacacacaccatgtctgtctttgaggga
gtgactctagtggtcacagcttctgtggatgtcattgagggtggcgacacctacaactct
ctcttagagtgcaccaacatattacatggtgtcctgccctaccttcctgcctctgagatg
cctctgcggcatgctatcaccggtctgtgcgaggcctggtggaagaaaggcctcctgggg
aaagaagagctgggccgcacagccttccttgtttgcctggagaagaccctcatactgaag
aaaccaggggctgagatccaaaggctgtggggtttccatgaagtgctgctcactgtggac
tttgcgtcggagagcagccaggagctgatcgatctgctgctacagtgcttcctcagtgtc
aatcacattagaaacgaagatggaaagcgtctcatggtgttcctctttagctggaatgtc
aacttcatccggatgatccatggaaccatcaaaaatcagctgccctactttgcaaattcc
ctcactgacaacatagctgagatctactgccgggcctggaagaaagcctctggggtctgt
ctggagcagatcgagagcacctgcatccaggacttcatgcagcacgctgtactcctgcac
aggacctcacccgtccatgccaaagtcagacagatactgagctactttcacaaacggaag
ggccgccacgggttggatgagatgctctacagactctacaagcccattctctggagagcg
ctaagcgctgccaactctgaggtccgggccaatgccactctgctcttcaccgaggccttc
cctatccacgaccctagccagagcagtgagaagatggacgagaccatccagaaacaactg
gacacgctggtctgcctgctggaggaccctcagcccctggtgcgctccacagccaccctg
ggggtctgtaagatcctggccaagtgttgggaggtcatcccccccactgtcatcaccgac
ttccttaagaagttggtggtagagctggccaatgataccagctcccctgatgtccgctgc
tccgtcttcaagtgtttgaccatcgtattggacaatggccaaagtcacccgttgctggag
cagctactgcctgctctgaagaacagcctccatgacacctcggagaaagtacgcgtggcc
ttcctcgacatgctgctcaagatcaaagcagtgcgagccgccaagttctggaaggtgtcc
tccatggaacacctgctagcccgtctggccgtcgactcgcagcctgtctccaagcgcatc
gtcaacctcctcttcaattccttcttccccgtcaaccaatcagaggaggtgtggtgcgag
cgctgcgtcaccctgattcagatgaaccccaaggcagctaggaagttctaccagtatgcc
cacatctacacagcccccactaacatagtcaagctgatgctgataatccgccggtgtttg
aacgcctgcatccagactgaagacctgaatgagacaaactccaacaacaaggagaacaca
agtgttctggaggatgtcctgtcggtcaaggacacggcgtccatggccagtctgctggag
gtagtggtgatcttgtggcggagtatccggaaagccctgcagctcaacaaggacgccctc
cagtacaccactgtcaagtttggctccgtcgtgcccaagtacttcaatgtcttccaggag
gagcgttgtacagttcccctcatccaactagcctccctactgcccccagcttctgtcccc
actttcagctgtggggtgctgtccaggctgaagaggctggaggcgggggccaaggtgtcc
cagtacagtcagatcatcgagtgcctgtgtagctggggccaggccgcacacgtcctggag
ctcgtcacagactggctcactgatgcgttacccaccgccgcgggcaaagggaacaccagt
cggaaagtgcgcatccaggagacggtggaggccaaaccagacctagggctagattacctg
gagtacctggtcagccgtacctccacgcgggactgcatcctgcccttcaggcagggccag
ctcaaacagctgcacaaagccctcggggcctggaagtcagtgctgttatcccatctgagc
tcttctgagacccaggccaatattcccagagcagaaacagcactgagggcgtttgccctt
cacgcacgtctcagtgcccatctacagcacaaattctctgaggggagggatttcctggtc
cctgtggagaacatggcagtgtgggtggcagagagggtgctgcccttcctggtcagcccc
agtgagggaggtgtcactgagcagcagcgggacctcgccaggcaggtggtagagagttta
ctgatggtgtgcagagatgtgatccgggtgggtcttggggacgaggagttcaaagggcag
atccttcacctgtgctccatcgtgctcctctctgagaagggctacctgtgtgttcctctg
ctgttctttgtgctgacggaggtggcggagaactacgtccccgagaaccaggcccaggac
gaccagtcttccatcatcctcagcgtggtcaccaacgtcttccagaagatcctggaggtc
atggctcgccgcctaaggaaggaccctgaggagggccaggagctgtggtactcagctgtt
cccgctctaggagacttcctccaggtggttcaggcttggtcgggcgtcgactcaaacccc
ctaaacggggtgttttcaaccatctgtgctgccaccctcgctgcgacccaacactccctg
caaaaaatttcacatcctcaagaggtcacaacaccagagacggtccaggatttgcctcct
ctctcaagcatcttgttggatgttctcctcaaatcgcccccggtcaccagggccttcctg
gcagagatcaactcaactgtcgactccgaggtcattgatggtctaaccggattggctgca
gttcttcacattctggcagttgtcagacagactgggaagtttaaggaagatctgaagagt
acagctgtgtccgtccagaggcagcttcagaaacattacgctgtcaaggctgagaatgaa
ggacacatccagagggtaatctacgaatccgctatcaacactttgaatgagattctgatg
ccatgcccatga
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