Coregonus clupeaformis (lake whitefish): 121549994
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Entry
121549994 CDS
T08357
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121549994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121549994
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121549994
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121549994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
121549994
NCBI-ProteinID:
XP_041717971
LinkDB
All DBs
Position
34:complement(29652577..29685773)
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AA seq
1089 aa
AA seq
DB search
MSFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGY
HDRKQQYAIQRGNFDRCVCQAQSEGGPPISDAASLSLLTRQLLFFYRQSEDSQRLIWICQ
NLVKHNGQFVKLLLGSERQTCVFQIKRVLGFCCRLLQTCKDDSLNVAVPMRMLEIYSSER
TYLPVLQDVNCVASLIEQILHYMVQKGYYRSLYILVNHKLPSSLEYSDAPSGAHAIPLAS
TLLEHTLKPLHFTYSSCTTGARQYVFAAFTEEFISAPFTEQIFHFFIPALSDPRLHFPFE
AFLGSLQATVVSSAAAQKQAPWLFYFVLSAGETCLGSLSEEGLHLYLRALQTLLPLLPVS
ESTSRPESISDSEDEEDTNIQAPSTQHDSYRISVQLITEECVHKLDTKQQTNALLNLVWR
DSASEEVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLIQSMTTKMITGS
MVPLLQVISRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGYPMEGHGHSNTSM
MPFTLSELVTLSRLLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAE
QKRWVQLFKVITNLVKMVKARDIRRPFCPAGHWLSEEVNIRADKVTQLYVPSARNVWRTR
RMGRIGPLQSTLDVGMEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQ
GDGPFLDGINVTIRRNYIYEDAYDKLSPENEADLKKRIRVHLLNAHGLDEAGIDGGGIFR
EFLNELLKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGDSFARHYYFLGRILGKALYENML
VELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEDDVEDLGLNFTIVNNDL
GEAQVVELKPGGKDIPVSTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRM
FDQQEIQVLISGAHVPICLDDLKTFTNYSGGYTATHPVITIFWEVVESFTDEEKRKLLKF
VTSCSRPPLLGFKELYPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAI
ESSAGFELS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagctttgagggagatttcaaaacaagacccaaggtgtctcttgggggagcg
agtaaaaaggaggaaaaagcatctctcctacaccggacacaagaggaaaggagaaaaaga
gaggatgaaagacgaagattgaagaatgcaattatcattcaatcctatatacgaggatac
catgaccgaaaacagcaatatgccatccagaggggcaactttgaccgctgtgtctgccag
gcacagtcagaaggcggaccgccaatctccgacgctgccagtctcagtctcttaacaagg
caactgctatttttctacagacagagtgaggactctcagagattgatatggatttgtcag
aacctagtgaaacacaatgggcagtttgtgaagctgctgctggggtcagagagacagacg
tgtgtgtttcagattaagagggtcctgggcttctgctgcagacttctgcaaacctgcaag
gatgacagtttgaatgttgccgttcccatgaggatgctggagatctattcctccgagaga
acctatcttcctgtccttcaagacgttaattgtgtagcgtcgttaatcgagcaaattttg
cactatatggtacagaaagggtactacaggtcgctttatattctagtgaatcacaagctc
ccttccagtctggagtacagtgacgccccctctggagcacacgctatccccttggcaagc
acactgctggagcacacgctgaagcccctgcactttacctattcctcctgcacaacaggc
gcaaggcagtatgtgtttgcagccttcacggaggagttcatctcggcgccattcacggag
cagatctttcacttctttattccggcgctgtccgacccgcgcctccacttccccttcgag
gccttcctgggctccctgcaggccaccgtagtctcctctgcagcggcgcagaaacaggcg
ccgtggctcttctactttgtcctctcggccggggagacctgcctaggttccctatcagag
gagggcctccacctgtacctgcgagctctgcagaccctcctacctctcctccccgtgtca
gagagcaccagcaggccggagagcatcagtgactcagaggacgaggaggacactaacatc
caggctccgtccacacagcacgacagttatcggatatcggtgcagctgatcacggaggaa
tgcgtccacaagctggacaccaagcagcagaccaacgcgctgctcaacctggtgtggagg
gactctgccagcgaagaggtcttcaccatgatggcctccatttgccacacactcatggtg
cagcaccgcatgatggtgcccaaagtcaggcttctgtacagtttagcgttcaacgcacgt
ttcctgagacatctctggcacctgatacagtccatgactaccaaaatgatcacagggtcc
atggttccgctgctgcaggtcatctcccgggggtctcccatgtctctggaagactccaat
cgcatcatccccctcttctatctcttcagttccctcttcagtcactcgctcatctccgtg
cacgacagcgagttctttggctaccccatggaaggtcatggccacagcaatacgtccatg
atgccgttcacattgtccgagctggtgaccttgtctcggttactaagggacgcgtgtctg
ggcattatcaagctggcctacccagaaaccaagacggagcaccgcgaggagtacatggcc
gccttccgcagcgtgggcgtcaagaccaacacagaggtgcagcagcgcatccaggccgag
cagaaacgttgggtccagctattcaaggtcatcactaacttggtaaagatggtgaaggct
cgtgacatcagacgaccattctgtccagcaggccattggctctctgaagaggtcaacatc
agagcagataaggtgacccagttatacgtcccttcagccagaaacgtgtggaggacgcgg
aggatgggacgcatcgggcccctgcagtccacactggatgtggggatggagcctccacag
ctgtctgtgtctgaggagagacacttggccatcctgactgagctgcccttcgtcgtgccc
tttgaggagcgagtcaagatcttccagagactgatctatgcggacaagcgggacgtccag
ggagatgggccatttctggacgggatcaacgtcaccatcagacggaactacatctacgag
gacgcctacgacaagctctccccagaaaacgaggcggacctgaagaaacgtatccgggtg
cacctgctcaacgcccacggcctggacgaggcgggcatcgacggcggtggcatcttccgc
gagttcctcaacgagctgctcaagtcgggcttcaaccccaaccaagggttcttcaagacc
accaacgagggcctgctctaccccagccccaccgcccagatgctggtgggggactccttc
gccagacactactacttcctgggacggatactggggaaggccctgtatgagaacatgctg
gtggagctgccatttgccagtttcttcctatccaagctgctgggcaccagtgccgatgtg
gacatccaccacctggcctcgctggaccctgagatgtaccgcaacctgctcttcctcaag
agctacgaggacgacgtggaggacctgggactcaacttcaccattgtcaacaacgacctg
ggagaggcacaggtggttgagctgaagccgggagggaaggacatccctgtgtccacggcc
aacaggatagcatacatccatttagtggcagattaccgactcaacaaacagatcaggccc
cactgcctggccttcagacagggcctggccaacgtggtaaacctggagtggctgcgcatg
tttgaccagcaagagatccaggtgttgatatctggagctcatgtgcccatttgtcttgac
gacctgaagacctttacaaactactccggtggttacactgccacccaccctgtcattacc
atcttctgggaggtggtggagagcttcaccgatgaagagaaacgcaagctgctcaagttt
gtcaccagttgctcgcggcctcctctcctgggcttcaaggagctgtacccagccttctgc
atccataatggggggaacgacctagagcgcctgcccacggcctcaacctgcatgaacctg
cttaagctgcccgagttctgcgaccagcacctgatgaggaacaagctgctgtacgccatt
gagtcctccgcaggcttcgagctcagctga
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