KEGG   Coregonus clupeaformis (lake whitefish): 121549996
Entry
121549996         CDS       T08357                                 
Name
(RefSeq) sonic hedgehog protein A
  KO
K11988  sonic hedgehog
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    121549996
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cclu01002]
    121549996
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cclu00536]
    121549996
Peptidases and inhibitors [BR:cclu01002]
 Cysteine peptidases
  Family C46: hedgehog family
   121549996
Glycosaminoglycan binding proteins [BR:cclu00536]
 Heparan sulfate / Heparin
  Morphogens
   121549996
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint Hom_end_hint Ribosomal_S6e
Other DBs
NCBI-GeneID: 121549996
NCBI-ProteinID: XP_041717974
LinkDB
Position
34:29904845..29913187
AA seq 421 aa
MDEMLLLTRIVLFGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGTASVTLKDGSRKAVKDLRVGDKVLAANSDGDLAYSD
FIMFMDQDSSTRRVFYVIETKETTQKITLTAAHLLFVVNNSTDDLHSMSAVFASKVKPGQ
KVVVFDDLHNQLKSVTVGRIYMEEHEGSFAPMTVQGTIVVDQVLVSCYAVIEDHNLAHWA
FAPVRLSYWLSSLLSPKDYSMPNATLHEDGVHWYSKILYQLGTWLLDSHALHPLGMSINS
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacgaaatgctgctgttgacaagaatcgttctgttcgggttgatctgcttgtccttg
gtgtcctctgggatgggctgtggaccgggcaggggctacgggaggagaagacatccgaag
aagctgacacctctagcgtacaaacagttcatcccaaacgtcgcggagaagaccctaggg
gccagtggcagatatgaaggcaagatcacacggaactccgagcgatttaaagaactgact
cccaattacaatactgacattatctttaaggatgaagagaacaccggtgcggaccggctc
atgactcagagatgtaaagacaagctgaactccctggctatctctgtcatgaaccagtgg
ccaggggtaaagctccgcgtcaccgagggctgggacgaggatgggcaccatttcgaagag
tcgctacactacgagggaagggcagtggatatcacgacctccgatagagacaagagcaaa
tacggcacgctgtcaagactagcagtggaggctgggttcgactgggtctactacgagtcc
aaggcccacatccactgttccgtcaaagcagaaaactcagttgctgccaaatcaggaggc
tgtttcccaggcaccgcttccgtgactctcaaagatggaagcaggaaggcagtgaaagac
ctcagagttggcgacaaagtgctggctgccaacagtgatggggacctcgcatacagtgac
ttcatcatgttcatggaccaggactcgtcaactagacgagtgttttatgtgatagagact
aaagaaacgacccagaaaatcacccttactgctgcacatctcctctttgtggtcaacaac
tcaacggatgatctccacagcatgtcagcagtatttgcgagcaaagtcaaacctggacaa
aaggtggttgtctttgatgatttgcataaccaactgaagtcggtcaccgtgggacggatt
tacatggaggagcacgaggggtcctttgcgccaatgacggttcaaggaaccatcgtcgta
gatcaggtgcttgtgtcatgttacgctgtaattgaagaccacaatctagcgcactgggcg
tttgcacctgtcagactgagctactggctgtcctccttgctatccccgaaagactactcc
atgcccaacgccaccttacacgaggatggagtgcactggtactccaagattctatatcaa
ttaggaacgtggctcttggatagccacgcgcttcacccactggggatgtcaataaactca
agttga

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