Coregonus clupeaformis (lake whitefish): 121550017
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Entry
121550017 CDS
T08357
Name
(RefSeq) EMILIN-2-like isoform X1
KO
K24246
emilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121550017
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
121550017
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GFIT
Motif
Pfam:
EMI
C1q
DUF1664
Fib_alpha
HBM
Baculo_PEP_C
DUF4407
bHLH_PER
G-gamma
Motif
Other DBs
NCBI-GeneID:
121550017
NCBI-ProteinID:
XP_041718010
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Position
34:32358378..32388539
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AA seq
1088 aa
AA seq
DB search
MNCLPTGFILKRALFPLLLTFPLIYGTPSRYNQGYNMFQGSAYSGSEQRQRNKNWCAYVV
HKNVSCAVVGGTESFVLPESAPCPKHQPNCAQQVMYRTQFRPMYKVSYKLVTELEWRCCP
GHQGHDCKDLKGIPSHQTVLGPRPTLPPAPGHVPETQGPGQQAWGQSGHPWGAGRQPGGQ
TGQGPVGGQGGKQTTQPLEEEVQRLSQQVLDMQAAMTSLSANLRVDLQEDASKMLVTLLN
ILQQPDSVRGEQQSMLLQGLSLEKEYNTVDMDKFTSKINHLTDTINTKSKVLDDLQVRVN
HYDGQLRLLMEASPATPPPAPPANDATLRAYVDTKFHALKNEMMEGMEIKMADLKNSCDY
KMLSVQEQCEGQENSYLSLTELLESKEMDLRKEIQDLKNQLPNSQREDGTSSGVEELRKE
LFRVTEAQLSLQSSLEKKSKPDPLLPRVEELEARQNSSERSVEVHSLFLEEKLRREGAEG
AADLKKAMEDRMSSMEDQVTTLLVEISSPVSGAQTGLEALQSEVASHKTSVQALEDRLNA
LEHLCSTECKSDHPAIESIQQNLQVYRTSLDTMESSINEHSASLGDMEDFVQGQLLNHTA
SLTDVQEELGALKGRMGGQEGSLSALGLSLSQQSLELQGQLLNHSASLIGVEEALGALSG
RMGEQEGSLSALGLSLSQQSLQLQQLNTCCLRSAGPAHEARDLLELHLAQREKPRARLEE
LGREVRAEADHCRNRTEGVALDVASVDSRVTSLENVCGRLEPISSSLHRIKEGLNKHVTG
LWNCISRINGTLQAHTTDIRGLKRTYQNLQDHFSGITQDLHHLTTSPENTGVHVGVEESG
NPTETKPVPQSPVLPVGPIPDGALPHMMETGEAGAPGIIMSSKPPKGADGSMSPLKGFAG
APASPPSTGSLKPNIPVISVAHIPLRSSLHKPYLTLTGERVSFSAGLNRLPFPGEVGIIR
FNKVLVNDGGHYDPHTGIFNVPMEGHYLLSAVLTAQRGARVEAVFSVSNRSIQRLDTAGY
LPDNGGGGGAGSTSCDCGGSASLSLVLTLKRGDRAGLVLTAGKLAISENTEVLSTFSAVL
LYPTPSKQ
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaattgccttcccaccggattcatcctaaaaagggcattatttcccttattgctcacc
tttccattgatctatggaacgccgtcccggtataaccaggggtataacatgttccaggga
agcgcatactctggctcagaacaaagacagaggaataaaaactggtgcgcatacgttgtg
cacaagaacgtgagctgtgcggtcgttggaggcacggagagctttgtgctgccggagtcc
gcgccatgcccgaaacatcagcccaactgcgcgcaacaagtgatgtatcggacccaattc
cgccccatgtataaggttagctataagctggtgaccgagctggagtggaggtgctgtcca
gggcaccagggtcatgactgcaaagacctgaaaggcatcccatcccatcagacagtgctg
gggcctcggcccaccctgccgcctgcccctggtcacgtcccagagacacagggtccgggg
cagcaggcatggggtcagagtggccacccctggggggcagggaggcagccaggaggtcag
acaggccaagggccggtggggggccagggagggaaacagacaacacagccgctggaggag
gaggtacagcgtctgtcccagcaggttctagacatgcaggcagccatgaccagcctgtca
gccaacctgagagtggacctgcaggaggacgccagcaagatgctggtcacgctgctcaac
atcttgcagcagccagacagcgtgcgtggggagcagcagagcatgctgctgcagggtctt
tccctggaaaaggagtacaacacggtggacatggacaagttcacgagcaagatcaaccac
ctcaccgacaccattaacaccaagagcaaggtactggacgacctccaggtcagagtcaac
cactatgacggacagctccgcctgctaatggaggccagcccggccacaccccctcccgct
cctccggccaatgatgcgacactgcgcgcctacgtggacacaaagttccacgccctgaag
aacgagatgatggagggcatggagatcaagatggcggacctgaagaactcttgtgactat
aagatgctgtcggtgcaggagcagtgtgagggccaggagaacagctaccttagcctgacc
gagctcctcgagtccaaagagatggacctccgcaaggagatccaggacctcaagaaccag
ctgcctaattcacagagggaagacggaacctcttcaggggtggaggagctgcggaaggag
ctgttccgggtcactgaggcccagctgagcctccagtccagcctagagaagaagtccaag
cctgacccactcctgccccgtgtggaagagctggaggcccgtcagaacagttcggagagg
agtgtggaggtgcacagcctcttcctggaggagaagctgaggagagagggggcggagggg
gccgcagacctgaagaaggctatggaggacaggatgagctccatggaggaccaagtcacc
actctactggtggagataagcagccccgtatctggggctcagactgggctagaggcactg
cagagtgaggtggcctctcacaaaaccagtgttcaggctctggaggacagactaaatgcc
ctagaacatctgtgctctacggagtgcaagtctgaccatccggccatagagagcattcaa
cagaacctccaggtctacagaaccagcctggacacaatggagtctagcatcaatgagcac
tcagctagtcttggagacatggaagattttgtccaagggcagctcctgaaccatactgcc
agtcttacagatgtgcaggaagagctgggagctcttaaaggacgtatgggaggacaggag
ggctctctgtcagccttgggtctctctctcagccagcagtccctggagctccaggggcag
cttctgaaccacagtgccagtcttataggcgtggaagaagcgctaggagctcttagtgga
cgtatgggagagcaggagggctctctgtcggccctgggtctctctctcagccagcagtcc
ctgcagctccagcaactgaacacctgttgcctaagaagtgcagggccggcccatgaggcc
agggacctgctagagctccacctggcccagagagagaagccaagggccaggctggaggag
ctgggccgggaggtgagggctgaggcagaccactgcaggaacaggaccgagggcgtagct
ctggacgttgccagcgtggacagccgggttaccagcttggagaacgtgtgcggtaggctg
gagcccatctccagcagcctgcacaggatcaaggaggggctgaacaagcatgtgaccggc
ctgtggaactgcatcagccggatcaacggcacattgcaagcccacaccacggacatcaga
ggattgaagagaacataccagaacctccaggaccacttctcaggcatcacccaggaccta
catcatctgaccaccagtcctgagaacactggtgttcatgtaggtgtggaggagtctggt
aatcccactgagaccaagcctgtccctcagagccctgtcttacccgttggtccaatacca
gacggggccctaccacatatgatggagactggggaggcaggagcccccggaatcatcatg
tcttccaaaccacccaagggggctgacggcagtatgtcccccctcaagggcttcgctgga
gccccagcctccccaccatctacagggtctttaaagcctaatataccagtgatttctgtt
gcccacattcctctgagatcgtcattacacaaaccatatttaactttaacaggtgagcgg
gtgtccttctcggctgggctcaaccgcttgcccttccctggggaggtgggcatcatccgc
ttcaacaaggtgttggtgaatgatgggggacactatgaccctcacacaggcatctttaac
gttcccatggagggccactacctgctgagtgccgtgctaacagcccagagaggtgccagg
gtggaggcggtgttctctgtgtccaaccgcagcatccagaggctggacacggccggttac
ctgcctgataatggtggtggaggtggggctggctccaccagctgtgactgcggaggctct
gcctccctgagcctggttctaactctgaagcgtggggacagggcaggtttagtcctgacc
gcaggcaaacttgccatctcagagaacacagaggtcctctcaacatttagcgccgtgctt
ctctaccccaccccctcaaaacaatag
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