Coregonus clupeaformis (lake whitefish): 121550029
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Entry
121550029 CDS
T08357
Name
(RefSeq) POU domain, class 6, transcription factor 2-like
KO
K09368
POU domain transcription factor, class 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121550029
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121550029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
FtsX_ECD
CAF20
Motif
Other DBs
NCBI-GeneID:
121550029
NCBI-ProteinID:
XP_041718027
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Position
34:32890764..33007579
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AA seq
663 aa
AA seq
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MITGQLSKPLLSLRSEMSAAELRAEDKAATPDSKLNDEPLLLSSEATEREDTPNKLYGAR
DGSAQSDASSSPSEQCHLGQSHPTYPVGPQSLLVAQQLAQQLAGGSPGLNQPILIPFNTG
GHLGGQQGLVLSLPTANIQGLVAAAAAQGIMTLPLQNLQATSSLNSQLQHLQQLQQIQQH
HHHQQQQHHQQHQHSHSHAHNQLSSRGHMTPPSLQQSSVSVPSPGSASSTTSMTGSGQPP
QSSPLRQNQSPARSLPSPVTPPMPLQLNSLASQAAVAAAAMGSITGSQVFGNALSNLQAG
VTGQLVTNAQGQIIGTIPLMPNSGGPSSQSGGGNPALQVQPITPQLLTNTQGQIIATVIG
NQILPVINTQGITLSPIKPGQQLPQAQPVQTGPVSSQPNLLHMPHSQSPLRQVSSSSSSS
SSSSALSVGQLVSNPQMASSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSVAEG
PAYSQSAICRHTILRSHFFLPQEAQENTIGSSLTGKLNPGLLYPARFEKLDITPKSAQKI
KPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPHALEILNSHFEKNTHPSG
QEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPGDLDLDLGPTAPMDPLSDSLDE
TPK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagttgagcaagccgctgctctccctgcgcagcgagatgagcgcggca
gaactccgggcagaggacaaagcggccaccccagacagcaagctcaacgacgagcccctg
ctcctgtcctccgaggccacggaaagagaggacactcctaacaagctctatggagcccgt
gatggctctgcccagtctgatgccagcagcagcccgtcagaacagtgtcatctgggtcag
tctcacccaacctacccggtaggaccacagtctctgctggtggctcagcagctagcccag
cagctggctggggggtcaccaggcctgaaccagcccatcctcatccccttcaacacgggc
ggccatctgggaggccagcaggggctggtgctctccctgcccaccgccaacatccagggc
ctggtggctgcagcagccgcacagggcatcatgacccttcccctacagaacctgcaagct
acctcatccctgaactcccagcttcagcacctgcagcagctccaacagatacaacagcac
caccatcaccaacaacaacaacaccatcagcagcatcaacactcccacagccacgcccac
aaccagctgtcatcacggggtcacatgaccccgcccagcctacagcagtcctctgtctcg
gttccctcccctggctccgcctcctccaccacctccatgactggctctggccaaccaccg
cagtcttcgcccctccggcaaaaccaatcgccggcccgcagcctgccctcgcccgtcacc
ccgcccatgccactgcagttgaactctctggccagccaggcagcggtggctgcagcagct
atgggctccatcaccgggtcccaggtctttggcaacgccctctccaacctgcaagctgga
gtcacggggcagctggtcaccaatgcacaaggacagataattggaacgatcccactgatg
cccaactctggggggccctcgagccaatcagggggcggaaaccctgcgctgcaggtccag
ccaattacacctcagcttctgaccaacacccagggccagatcattgccacggtgatcggc
aatcagatcctgcctgtcatcaacacccagggaatcacgctgtcaccaatcaagcctgga
cagcagctgcctcaggctcagccggttcagacaggcccagtgtcgtctcagcccaacctg
ctccacatgccccacagtcagagtcctctccgccaggtctcttcctcctcatcatcatca
tcttcctcctccgctctcagcgtgggtcagctggtcagcaacccccagatggcctccagc
gaggtggatggggtcaacctggaggagattcgggagttcgccaaagcgttcaagatccgc
cgcttgtccctgggcctgacccagactcaggtgggtcaggctctcagcgtggccgagggc
ccagcctatagtcagtctgccatctgcagacacaccatcctgagaagccactttttccta
ccacaggaagcccaagagaacactataggtagcagtctgacaggcaaactgaaccctggc
cttttatatcctgccaggtttgagaagttggacatcaccccaaaaagcgcccagaagatt
aagcccgttctggagcgctggatggccgaggccgaggcccgccaccggtccggcatgcag
aacctgaccgagtttatcggcagcgagccctccaaaaaacgtaagcggaggacctctttc
accccgcatgctctggagatcctcaacagccacttcgagaagaacacgcacccctctgga
caggaaatgaccgagatagccgagaaactgaactatgaccgcgaggtggtccgcgtctgg
ttctgcaacaagaggcaagcgttgaaaaacacaataaagcggttgaaacagcccggtgac
ctggacctggacctcggcccgaccgcgcccatggaccctctctctgattctctggatgag
accccaaaatga
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