Coregonus clupeaformis (lake whitefish): 121550042
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Entry
121550042 CDS
T08357
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121550042
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121550042
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
121550042
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121550042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
121550042
NCBI-ProteinID:
XP_041718053
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All DBs
Position
34:complement(33695538..33707693)
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AA seq
763 aa
AA seq
DB search
MRLSSFLAVFRPALPLILGLFLGCSLSLLMVSWTQGDTDDSCGDELGDRGLFLGSNRGDL
PGDQRGGPGNEDFQPRVVPYHKDPNKPHKKVLRTRYIHTELGIRERLLVGVLTSRANLNT
LAVAVNRTVAHHFHRTFFFTGLRSPKVPHGMAVVAHGDDRPVWLMYETVRHLHQHYGLDY
DWFFLAQDDTYMQAERLAELVGHLSAGQDLYMGRAEEFIGGEERARYCHGGYGYLLSRSL
LARLQPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMTYRYFELGKNADPERED
RAQFKNAFTVHPVSEPSLMYRLHKRFSQIELDWTYLQIQQLQVQINNLSELTPEGKVGAI
WPIGVNPPFRPKTRFEVINWEYFTDEHIYSCSDSSPKCELRGADRADVSAVLETAVERLN
ERYQPQLRFRKRHLLNGYRRFDPTRGMEYVLDLALEAFTQKGHSQIITKRVSLLRPLSAI
EIIPMPYVTEATRVQVILPVTAREQDFVSNFLDMYVMNTLDMHDNVLLTFLFIYDPFDAQ
RVSQLDVFARIKAMIGEVEKRYGDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLAS
VWTEVNADFLNRCRMNAISNWQVFFPAHFQEFSPAIVYRDQHSSVSFAAEAPRDGHFDRH
VFEEACFYNADYMASRTKMAADILDNDELLESMDVYEIFVRYSGLHVFRAVEPALVQKYL
RRACNPRFSEDIYHRCMLSNLEGLASRSHLALALFEQEQANST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctcctccttcctggccgtgttcaggcctgctcttccccttatcctggggctc
tttttgggatgcagcctgagcctgctgatggtctcctggacccagggagacacagatgac
tcgtgtggagatgaactgggcgataggggtctcttcctgggcagcaataggggagacctc
ccaggggaccagagaggtggtcctgggaatgaggacttccagccacgcgtagtaccatac
cacaaggaccccaacaaaccacacaagaaggtcctcagaacgcgctacatccacacagag
ctgggcatccgagagcgcctcctggtgggcgtgttgacctcgcgggccaacctcaacacg
ctggccgtggcggtgaaccgcaccgtggcccaccacttccaccgcaccttcttcttcacc
ggcctgcgcagccccaaggtcccccacggcatggcggtggtggcccacggcgatgaccgg
cccgtgtggctgatgtacgagactgtgcgccacctgcaccagcactacggcttggactac
gactggttcttcctggcccaggacgacacctacatgcaggccgagaggctggccgagctg
gtgggccacctcagcgcgggacaggacctctacatgggccgggccgaggagttcattggt
ggggaggagagggccaggtactgccacgggggttacggctacctgctctcccgcagcctg
ctggcccgcctgcagccccacctggacacctgccgcaacgacatcctcagcgtcaggcct
gacgagtggctgggccgctgcatcatcgactacctgggtctcagctgtgtggaggtgcac
caggagatgacatatcgctactttgagctggggaagaatgcagacccagagcgagaggac
agagcccagtttaagaatgccttcacagtccaccctgtgtcagaacccagcctcatgtac
cgcctgcacaaacgcttcagccagatcgaactggactggacctacctacagatacagcag
ctgcaggtccagatcaacaacctgagtgagttgaccccagagggtaaggtgggggccatc
tggccaatcggggtcaatcctcccttcaggcccaagactcgtttcgaggtcatcaactgg
gagtacttcaccgacgagcacatctactcatgctccgacagctcccccaagtgtgagctg
cggggcgccgaccgggccgacgtgagtgccgtgctggagacggccgtggagcgcctcaac
gagcgctaccagccccagctgcgcttcaggaaacgccacctgctcaacggctaccggcgc
tttgaccccacccggggcatggagtacgtgctggacctggccctagaagccttcacccag
aaaggtcacagccagatcatcaccaagcgggtcagcctgctccgccccctcagcgctatc
gagatcatccccatgccctatgtgacggaggccacccgggtgcaggtcatcctgcccgtc
acggcccgcgagcaggactttgtgagcaacttcctggatatgtatgtgatgaatacactg
gacatgcacgacaacgtcctgctcaccttcctgttcatctacgaccccttcgacgcccag
cgggtcagccagttggacgtgttcgctaggatcaaggccatgatcggcgaggtggagaag
cgctacggcgatgtgaagatcccctggatcagcgtgaagacggaggtgccctcgcaggtc
aagctgatggacatcatctccaagaagcacccggtggacacgctcttcttcctggcctcg
gtgtggaccgaggtcaacgccgacttccttaaccgctgccgcatgaacgccatcagcaac
tggcaggtgttcttccccgcccacttccaggagttcagcccagccatcgtgtaccgcgac
cagcattcctcggtctcattcgctgcagaagcgccgcgcgacggacacttcgaccgccac
gtcttcgaggaagcttgcttctacaatgccgactacatggcgtcacgcaccaagatggcc
gccgacatcctggacaatgacgagctgctggagagcatggacgtgtacgagatctttgtg
cgctactcgggcttacatgtgttccgggcggtggagccggcgctggtgcagaagtatctg
cggcgggcgtgcaacccgcgcttcagcgaggacatctaccaccgctgtatgctcagtaac
ctggagggtctggcctcgcggtcccacctagccttggccctgtttgagcaggagcaggcc
aacagcacctag
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