Coregonus clupeaformis (lake whitefish): 121550079 Help Entry 121550079         CDS       T08357                                  Symbol rttn Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cclu03037]     121550079 (rttn) Cilium and associated proteins [BR:cclu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    121550079 (rttn) SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N Nup188_N-subdom_III TPR_Trm732_C Motif Other DBs NCBI-GeneID:  121550079 NCBI-ProteinID:  XP_041718139 LinkDB All DBs Position 34 Genome browser AA seq 2258 aa AA seqDB search MELSPLIKKIGHSLAEIRVRALKSIICKLDHSLLSVSDLVQEKMLFVYLLEWFNFPEVPI QEEVLQLIRTLSKHPTAAQMLRDVGAVEFLTQLSPNVEARLRAIIDGIFDLLFQLPELLP VCPTIYSNEHQLLNTATAVPLVEDSPAVGYFQTKRPSHVDFPPQRIAVSNYFRCLKFSTF PWLALTTTDQHILSSNESSLRSNNHNLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLLS ILRLTPGESEAGYLRLQAVACLQQLCVGLRRRLRFHRDPSFYSAKQDPVSQNSSLSYSQE VRGGGAQRSLASSPGGECFPRPSVVGRNGQRPRGDGQDGDAASNSSSSSQRGGAAAQASR QTAPSPADAAQLELPDLGVEDVLELQLQQLSLAQFTLATMEHTIPLLRTDGVRVFRGVCE LLCEAVVLLRDCVCDLVWDDTSLMGVELREKLQGTMETLCDIMAYHKSCSSDCPESSLVQ HRLAYAATAIFTIRLLQTILPLEKASDNLPESAVAVLLSLCLDRPFSLAYPSMAEAAVAY LEQVDPEGHALYRRTSRAALWMESTCMFLKETQQQGDKNWLELLELADQAIDGLPYHQHL PIVKECIHICSYLWKFEQASPLLQTESQRVLLKLLSHPLLPVKTETYTCTLNVVKECLGV QNVVKPVSSVCSGVHFLLHPKVLYEISTFGLQDPAGKVNSAAKDILLFLLKGQLMMTAST WDRFNQALYPVIPILQSYAGTEDALGNCVLLISEVSNEVRDGVFPNTAKLRAALRLLFTK EPEVRAAAVQHLLPHLTSVEGATTARPALEGPVLSSLPSLFCLTNALDINLDSSDRSFLK VESVEKLFSILTSDTVDLTLRRSAAEQLAVVLQETAMHPVLKSLGVADKVICLITESVND HMKSMDCLLEPCVCILRKLVYADPSLRHLLAEKTPLLITLLRTSLLVKENKGDVSEVAVL MCLLLFDEIATIEVWSDKSSSDVALSPFSLPVSVIRRYSLPFQAASHHAVSPYCSVLPPY SDLLSLTPAKETLQLAWNTAWHSGIDNLLKELRGIRSDVADFHGDLSLSESQVLSLRATH LPSGLQDCVEDIVMAAGHASVTSALSRLRLHLLIDRLAITGTHTHRCRDTLRSLTWQPAI ARFVQVRPACVEDERLLMDVILFLSAYFKQSHLETEDTDLRWILELLLKQESNSLLDLLL GEELQTHTPTHPASQGETEELRAQINQRLQRELTGFMNTLLHRLKHTTDRFCLALAGPFE SQLAVRLLQCLRVSDAPRFYGLPSLERNLLGMVSLTAQPGWSSHCPTMEPQSLCTKYLSG LLEVISSFYVEWGGNSMSFMGKGVTKNAVICLLHMSHEMMAQSKDKDFISQWSLGQEAGS DDPSGSQMGLAWLIPLWVDRDPEVRFASLGVGSALSSVPSGCQSLSSSCQNISGGLWGTL LNILLDQQESTMVRREAAFILQNLLVMPMPATADQVTDSTWQSPCVHDESSGVCLVGLPA LQALLYHCQFFQHTALMATSCYRGRYTFDLQPSARDPGPQDSTTEDADDSLRLWRPPNPV PVIPSRASGSLSTSSTLIIPGGSGLQSAVPTSLNATAQDTPASRLMAQGQSDTDTSDSVL SQDSRLGDPAPDPTCVIVTPDLLSALCGLLANLLAVLPEFTLSALTHSQLLQSLASLVDA AAIERCLCELKTNTLPGDQEDIKRQVLTLLQFLSSFSKFLKSCFILSSDLIGQMDFLKPL LANLFTVLTLDTKDLDGGTRGVMCVCWTDVLMLLATVVRRDGSAAYPSVSAALGRRWNTF TATLSVCVDQSFSDPPLHAAALQFLCVILSEEAKRRPLEVTTLNPDLHLTPLSEALNGAS GGQLCELLLESFEKRAFQDPVKKKTAKALMALLACSPTGQNHAAKAGLIDSCVEQMKLMH NHLHMESVRPGRGRRKEESYMKELKMSLEILRNCLYHNTQSKAVATDCRLAAVLHALWPW FLLDDAAMEAVLELLCVYTANCTTACSSLCCGVAPGLASGPRGPPGGSLMHCVMKLASGI AHDNSPVQQLAFSLLANLAINKDCKGVLQKSNFLQLFLSLPVPKPGSKTGPGAGGLVGLW LRLLLSVSFGEDGQLSVLRLTGALDLLADLAATQPQRHRHHGNGSRPITMADNALLILHN VCFSSTNKPKVLAHDKAMRVLVSCLKCKETEVRSIGASALWALLHNYQKAKTTLKCPSVR LRVDEAYKAAKKDAEKKPDTMNTYLLKCLENLTQLLNT NT seq 6777 nt NT seq  +upstreamnt  +downstreamnt atggagttatctccgcttataaagaagatcggtcactccttggcagagatcagagtccga gcattgaagagcatcatctgtaagctagaccactccctcctctctgtctctgacctggtc caggagaagatgctgtttgtttacctgctggagtggtttaacttccccgaggtgccaata caagaggaggtcctgcagctgatcaggactctgtccaagcaccctactgcagcccagatg ctgagagatgtcggggcagtggagttcctcacccagctctcccccaatgtagaggcacgg ttaagggccatcatcgacggcatctttgacctgctgtttcagcttccagagctgcttcct gtttgtccaactatctattctaatgaacaccagttactaaacactgctactgcagttccc ctagtagaggactctccagcggtgggctatttccagaccaagaggccgagtcacgttgat tttccaccacagaggatagcagtgagtaactattttagatgtctgaagttttctacattt ccatggttggctttgaccacaacagaccaacacatattgtcatctaatgagagttctcta aggagtaacaaccacaacttggtgaggaccacgtgtgagctcctacgtgacgtcatcatg caggacttcccggctgagatatttctccagcggcccagtatcgtgcagaacctcctgtcc atcctgaggctgactccaggtgagagtgaggcaggctacctgagactgcaggcagtggcc tgtctacagcagctgtgtgtggggctgaggaggagactacgtttccacagagaccccagc ttctactccgcaaagcaagacccagtgtcccagaactcgtcactctcctactcccaggag gtgcgtggagggggggcccagcgctccctggcctcgtccccaggaggagagtgctttcct cggccgtctgtggtgggtcgcaacggccaaagacccagaggggacggacaagatggggat gctgcctccaacagcagcagtagctctcagagaggtggagctgcagctcaggcctccagg cagaccgccccctcgcctgcagacgcagcccaactagagctgcctgatctgggggtggag gacgtcctcgagctgcagctccagcagctcagcctggcccagttcactctggccaccatg gagcataccataccgctgctcagaacagatggcgtgcgtgtgttccggggtgtgtgtgag ctgctttgtgaggcggtggtcctgctgagagactgtgtgtgtgatctggtctgggacgac accagcctgatgggggtggagctgagggagaagctgcagggcaccatggagacactgtgt gacatcatggcctatcataagagctgttcctcagactgtcctgagagttcattggtccag cacagactcgcctacgcagccactgccatcttcaccatcagactgctgcagaccatcctg cccctggagaaggccagtgataatctcccagagagtgctgtggcagtcctcttgtctctg tgtctggaccggcccttcagcctggcctatcccagcatggcggaggctgcggtggcctac ctggagcaggtggaccctgaaggccatgccctctacaggaggaccagccgtgctgctctc tggatggagtccacctgcatgttccttaaggagacgcagcaacagggagataagaactgg cttgagttactggagctggcagaccaggccatagatggccttccataccaccaacaccta cccatcgtcaaggagtgcatccacatctgctcctacttgtggaagtttgagcaggccagt cctctgcttcagacagagagccagagggttctactgaagcttctgtcccatcccctcctc cctgtcaagactgagacctacacctgcactctcaatgtagtcaaggagtgtctgggggtt cagaatgtggtcaagcctgtgtcgtcagtctgtagtggggttcacttcctccttcacccc aaagtcctctacgagatcagcacattcggactccaggacccagctgggaaggtgaactct gctgccaaggatattctgctcttcctgctgaagggccaattaatgatgacagcatcaaca tgggacaggttcaaccaggcactttacccagtcatccccatattacagagttacgcaggc acagaggatgcgctgggaaactgtgttcttctgataagtgaagtgtcaaacgaggtgaga gacggcgtgtttccaaacacagccaagttgagagctgcactacgactactctttactaag gagccggaggtccgagctgcagcggtccaacaccttctaccccacctgaccagtgtagaa ggggctaccacagccagaccagccctggagggtcctgtcctctcctctctcccctccctc ttctgtctcaccaacgcactggacatcaacctggacagcagcgacaggtccttcctcaag gtggagtctgtggagaagctgttcagcatcttgacctctgacactgttgacctgaccctc aggaggtcagcagcagaacaactggccgtcgtcctacaggaaacggcaatgcacccagtg ttgaagagtcttggtgtagcagataaagtgatctgcctcatcacagagagtgtgaacgac cacatgaagagcatggactgcctgttggagccatgtgtgtgtatcctgagaaagctggtg tatgcagacccctccctgaggcaccttctggctgagaagacccccctcctcatcactctg ctcaggacttcattgcttgtcaaggagaacaaaggggatgttagtgaggtggctgtgttg atgtgtctgctgctctttgatgagattgccacaatagaagtgtggtcggacaaatccagc tccgacgtggctctctcaccattttctctcccagtgtctgtcatacgaaggtacagccta ccgttccaggctgcgtcccaccacgcggtgagcccctactgctccgtcctgcccccatac tctgacctcctctccctgacccccgccaaggagaccctgcagctggcctggaacaccgca tggcattctgggatagataacctcttgaaggaactccgtgggatccgcagtgatgtcgcc gatttccacggtgatctgagcctgtcagagtcgcaggttctgtcgctacgggcaacacac ctccccagcggccttcaggactgcgtcgaggacatcgtcatggcagcaggccacgcctct gtgacctctgcactctccaggctccgcctccacctgctgattgacaggctggccatcaca ggcactcacacacacaggtgcagggacacactccgttccctcacctggcagcccgccata gcaaggtttgtgcaggtgcgtccagcgtgtgtggaggatgagaggttgctgatggacgtt atactgttcctgagtgcctacttcaaacagagccatttagagaccgaggacacggaccta cgctggatactggagctactcctcaaacaggagagcaactcactgctggacctgctgctc ggcgaggagttgcagacacacactccgacacaccctgcgagtcagggagagacagaggaa ctgagggcccagatcaaccagagactacagagagaactgactgggttcatgaacacttta ctgcaccgcctcaaacacaccaccgacaggttttgcttggcgttggcggggcccttcgag agccagctggcagtgcggttgctccagtgcctgcgggtgtcagatgccccacggttctac ggcctccccagtctggagaggaatctgctgggcatggtcagcctcacggcccagcccggc tggagctcacactgtcccaccatggagccccagtctctctgcaccaagtacctcagcgga ctactggaggtgatctcgtcattctacgtggagtgggggggtaattccatgtccttcatg gggaaaggagtcaccaagaacgctgtcatctgtctgcttcacatgtcccacgagatgatg gcccagagcaaggacaaggacttcatttcccagtggtctttgggtcaggaggcggggtct gatgaccccagtgggtcacagatgggtctggcctggctcataccactgtgggtggacaga gacccggaggtgaggtttgccagcctgggtgtgggctctgccctgtcctctgtgcccagt ggatgccagtctctgagtagcagctgtcagaatatcagtggaggtctgtggggaaccctg ctcaacatcctcctggaccagcaggagagcaccatggtccgcagagaggcagcgtttatc ctccagaacctactggtgatgcccatgcctgccacagctgaccaggtcacagactctacc tggcagagtccgtgtgtccatgatgagtcttcaggtgtatgtctggtgggtctcccagcc ctacaggccctgctctaccactgtcagttcttccagcacactgcattgatggctacatcc tgctacagaggcaggtacaccttcgacctgcagccctcagccagggaccccggcccacag gacagcaccactgaagatgcagatgactccctgaggttgtggagacctcctaaccctgtc ccagtgattcctagcagggcctctggctccctgtccacctccagcactctgatcatacct ggaggctcagggctgcaatccgctgtacccacctccctcaacgctactgcgcaagataca cccgctagcagactgatggctcaaggtcagagtgacacagacaccagtgactctgtcctc tcccaggactccagactgggtgaccccgctcctgaccccacctgtgtcattgtgacccct gaccttttatcagcgctctgcggcctcctggccaacctgttagccgtgctaccagagttc accctctcagccctcacgcacagccagctcctccaatcactggccagtttggtggacgca gcagccatagagagatgtctgtgtgagctgaagactaacacactaccaggagaccaggag gacattaaacggcaggtcctgaccctgctccagttcctgtccagcttctctaagttcctt aagtcatgtttcattctgagctcagatctgattggtcagatggacttcctgaaaccgcta ctggccaatctcttcactgtcctcacactcgataccaaggacttggacggtggtacccgt ggtgtgatgtgtgtttgctggacagacgtgttgatgcttctggctactgtggtgaggagg gatggctctgcagcgtacccatctgtctctgctgcactggggagacgctggaacacattc acagccacgttgtcagtgtgtgtggaccagtcgttcagtgaccctcccctccatgcggcg gcactacagttcctgtgtgtcatcctatctgaggaggctaagagacgacccttagaggtc accaccctgaacccggacctccatctgacccctctgtctgaggccctgaacggcgcctcc ggtggacagctctgtgaactattgctggagagttttgagaagcgtgcgttccaggaccca gtgaagaagaagacagctaaagccctcatggctttactggcctgcagtcccactggtcag aaccatgctgctaaagctggtttgatagacagctgtgtggagcagatgaaactgatgcac aaccacctccacatggagtcagtcagacctggcagaggaaggaggaaggaggagagctat atgaaagaacttaagatgtctctggaaattctcaggaactgtctttaccacaacacacaa tccaaagctgtggccactgactgtcgattggctgctgtgctgcacgccctttggccttgg ttcttattggatgatgccgctatggaggcggtcctggaactgctgtgtgtctacacagcc aactgtaccacagcctgtagctctctgtgttgtggtgtggcccctggtttggcctctggc ccccgagggcctccaggtggctccctgatgcactgtgtcatgaagctggcctctgggatt gcccacgacaacagccctgtccagcagctggccttctccctgctggccaacctggcaatc aacaaggactgtaaaggagtcctgcagaagagtaacttcctgcagctgttcctgtccctg cctgtccctaagccaggcagtaagactggtcccggtgccggggggctggtgggcttgtgg ctgaggctactcctgagtgtctccttcggggaggacggccagctgagtgtcctgaggctg acaggagccctggacctcctcgctgacctggccgctacgcagccccaacgccaccgtcac catggcaatgggagcaggcccatcaccatggcggacaacgccctcctcatcctccacaat gtctgtttcagctccaccaacaaacccaaagtactggcccacgataaggccatgagggtg ctggtgtcctgtctgaagtgtaaagagactgaggtccgctctataggagcctcggcccta tgggccctgctccacaactaccagaaggccaagaccactttgaagtgtccctctgtcaga ctcagggtggatgaagcctataaagctgctaagaaagatgcagagaaaaagcctgacacc atgaacacctacctgttgaagtgccttgagaacttaactcagctgctgaatacctga

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