Coregonus clupeaformis (lake whitefish): 121550087
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Entry
121550087 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121550087 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121550087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550087
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121550087
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
121550087
NCBI-ProteinID:
XP_041718148
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Position
34:44193561..44261843
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AA seq
1284 aa
AA seq
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MRPTEEDRDSVVLSSDIIMSNSTSSPKSPLCCPEDSSSIESSEHQLDSLTFDPDDPRVMA
LPYDRDHASSERRSSPTPTSVSYDFDTTSTNSEETEESILPVSGGNANLHKPMKSKSKGG
QAGRSKSSKFSVFAKMPSFRKGKSLKNAKGEGLPRDSLDLGLSRDLGGGQGGDTSDDDSV
FLKGDIQNQTVQQSFSSGLGGRYETEEEDYGFLPSTPRTRHVRLLFREGPGDTPDGPSSP
DTTLTSQPGGLRHNQTRAPEGLHGYKRSKSSDSLNLRMRFAQAHKSLSSLFESRSMDKEN
EEEQGSVETGREGEVGRANHSWRRLKRERAKEAELLRRTLSVPVGGGGDGGVRTPRQNHS
DYASCSDSASVLSVPGSPSSLRALCLTDPLTKRGFQDSHSGAGENTPLGCKSEGQRRKGK
VPPNGLSINFTDSGPHSSDDSEAPPTNDSSPLSPMSPASLAALANQLSWSSSRSPGGAYE
STASSMAATPDTPVRPMSPKPHSPRPAAQRRPFRYPNSASARASALSLLLMAQSASVEGL
SDPPEKPKTLKPRAGPLGSSSLSPLEDSGVDSQSQISLLTPMSINQFETQGGCRPTSQAG
GGKRLAELKSPGSGLVTTASALRTPSGHRPNMERDRGPRCHRCSSDDLWIEEEKRRKRKL
ARVVRGSLGQLNTHCPENLEKARARVSLSTMDAFSGMPLKAHCFSQSTPIGLDCLGWRRR
ISYPSVIVPDGGGEKASLGDDLGSDEDLYEEFRSSGHRFGHPGGGGEQLAINELISDGSC
VYAEALWDHVTMDDQELGFKAGDVIEVVDATNKEWWWGRILDSEGWFPASFVRLRVNQDE
PMEEYLAQLEEAGAGEEDRPGVGLILGPGLPCKDQMRTNVINEIMSTERDYIKHLKDICE
GYIKQCRKRIDMFTEEQLRCIFGNIEDIYRFQKKLLKGLEKKFNKEQPHLSEIGSCFLEH
QTDFQIYSEYCNNHPNACVQLSRLMKTNKYVFFFEACRLLQKMIDISLDGFLLTPVQKIC
KYPLQLAELLKYTNPQHRDYKDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSIEDW
EGEDILSMSSDLIFSGELTKISQPQAKSQQRMFFLFDHQMVYCKKDLLRRDMLYYKGRMD
MDLMEVVDVEDGKEKDFNVSVKNALKLRSLAGDEVHLLCAKKPEQKQRWLRAFQDERTQV
QHDLETGFSITEVQKKQAMLNACKSHPAGKPKAVTRPYYDFLLRQKHPSLPSTVPQQQVF
MLAEPKRKATTFWQNIGRLTPFKK
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccactgaggaagacagggacagtgttgtcctgtctagtgacatcatcatgtcc
aactccacctccagccctaagagcccgttgtgttgccccgaggactcatccagtattgag
tcatcagagcaccagctggactcgttgacctttgaccccgatgaccccagggtcatggcc
ttaccatacgacagggaccatgcgagcagcgagagacgctccagtccaacccccacctct
gtgtcctacgactttgacaccaccagcactaacagtgaggagacggaagagtccatcctg
cctgtctcgggggggaacgccaacctccacaaacccatgaagagcaagtctaaaggtggc
caggcagggaggtccaagagctctaagttttctgtctttgccaagatgccttctttcagg
aaggggaagagtctgaagaatgccaagggggagggcttgccccgggactcacttgacctg
ggcctgagcagggatctggggggtggacaggggggagacacctcggacgatgacagtgtt
ttcttgaagggggacatccagaaccagacggttcagcagtccttctcctccggtctgggg
ggtcgctacgagacagaggaggaggactacggcttcttaccctccacacctcgcacccgc
cacgtccgcctgctcttcagggaggggcctggggacacccctgacgggcccagcagccca
gacaccaccctgacctcccagcccggaggtctcagacacaaccagaccagggcccccgag
ggcctgcacggctacaagaggagcaagagctctgacagcctcaacctccgcatgcgcttc
gcccaggcccacaagtccctgtccagcctgttcgagtctcgctccatggacaaggagaac
gaggaggagcaggggagcgttgagacggggagagaaggggaggtggggcgagccaatcat
tcttggaggaggctaaagagagagagggccaaggaggcagagctgctgaggaggaccctg
tctgtcccggtcgggggcgggggggatggtggtgtgaggacgcccagacagaaccacagt
gactatgcgtcctgctctgactctgcctcagtgctcagtgtccctgggtccccttcctct
ctcagggccctgtgtctcaccgaccccctcaccaagaggggtttccaggacagtcacagc
ggggccggggagaacaccccactgggctgcaagtcagagggccagaggaggaaagggaaa
gtcccacccaacggcctgtcaatcaacttcaccgactccggaccgcactcctcggacgac
tctgaagccccacccacaaacgattccagccccctgtcgcccatgagccccgcctctctg
gccgccctagccaatcagctgtcttggtccagctccaggtccccaggaggagcctatgag
agcacagcgtctagcatggcagctacaccagacaccccagtgagacccatgagtcccaag
ccccacagccccagaccggctgcccaacgcaggcccttccgctaccccaattctgcctca
gcccgggcctcagccctgtccctgctcctcatggctcagtcagccagtgtagagggcttg
tctgacccaccagagaagcccaagaccctgaaacccagagcggggccgctaggctcctcc
tccctcagtccattggaggacagcggagtagacagccaatcccagatcagcctgctcaca
cctatgtcaatcaaccagtttgagactcagggtggctgtagacccacaagccaggcagga
ggagggaagaggctagcagagctgaagtctcctggttctggactggtcactactgcctca
gccctcagaacaccatcaggccacaggccaaacatggagcgggacaggggtccgagatgc
caccgctgctcctcagacgacctgtggatcgaagaggagaagagacggaagcggaagctg
gcccgagtcgtgaggggcagcctgggacaactcaacacacactgtcctgaaaatctggag
aaagctcgggcgcgagtgtccctgtcgacaatggatgcgttctccgggatgcccctgaag
gcccactgcttctcccagagcacccccatcggactggactgtctgggctggagacgacgc
atctcctacccctcggtgatagtaccagacggaggtggagagaaggccagtctgggtgat
gatctaggcagtgacgaagacctgtatgaagagttccgcagctccggacatcgctttgga
cacccagggggaggtggagaacaactggccataaatgagctgatcagtgatggcagctgt
gtgtacgccgaggccctgtgggaccatgtcaccatggacgaccaggagctgggcttcaag
gcgggggacgtcatcgaggtagtggatgccaccaacaaggagtggtggtggggacgcatc
ctggacagtgagggctggttcccagctagctttgttcggttgcgtgtgaaccaggatgag
cccatggaggagtacctagcccagctggaggaggctggtgctggggaagaggaccggcca
ggggtgggtctgatcctgggaccaggcctgccatgtaaggaccagatgaggactaacgtt
atcaatgaaatcatgagtacagagagagactacatcaaacacctcaaagacatctgtgag
ggttacatcaagcagtgccgtaagaggatagacatgttcacagaggagcagctgcggtgt
atcttcggcaacatcgaagacatctaccgcttccagaagaagttactgaaaggtctggag
aagaagttcaacaaggagcagccgcacctcagcgagatcggatcctgcttcctcgaacac
caaacagacttccagatctactcggagtactgtaacaatcacccaaacgcctgtgtgcag
ttgtccagactgatgaagaccaacaagtatgtgttcttcttcgaggcctgtcgtctgctc
cagaagatgattgacatctcgctggatgggttcctgctcacgcccgtccagaagatctgc
aagtaccctctgcagctggccgagctactgaaatacaccaacccccagcatagggactat
aaggacgtggaggctgccttgaacgccatgaagaacgtggccaggctgatcaatgagagg
aagcggcgcttggagaacatagacaagatcgcccaatggcagagctccatagaggactgg
gagggagaagacatcctcagtatgagttcagatctgatcttttctggagagctgacgaag
atctcccagcctcaggccaagagccagcagcgcatgttcttcctcttcgaccaccagatg
gtctactgcaaaaaggacctcctgcgcagggacatgctgtactataagggtcgcatggac
atggacctgatggaggtggtggatgtggaggacggtaaggagaaggacttcaacgtgtca
gtgaagaacgctctgaagctgcgctcgctggcgggggatgaggtccacctgctgtgtgcc
aagaagcctgagcagaaacaacgctggctccgagccttccaggacgagaggacgcaggtg
cagcatgacctcgaaacaggattctccatcactgaggtccagaagaaacaggccatgctg
aacgcctgcaaaagccatccagctgggaagcccaaagcagtgacccggccctactatgac
ttcctgctgcgtcagaagcacccgtctctgcccagcaccgtaccccagcagcaggtcttc
atgctggctgagcctaaacgcaaggcaaccaccttctggcaaaacatcggcagactgaca
cctttcaagaagtga
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