Coregonus clupeaformis (lake whitefish): 121550091
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Entry
121550091 CDS
T08357
Name
(RefSeq) guanine nucleotide exchange factor VAV3 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121550091
09142 Cell motility
04810 Regulation of actin cytoskeleton
121550091
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
CDC24
SH2_1
LZ3wCH
C1_2
Prok-RING_1
PH_10
SRA1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
121550091
NCBI-ProteinID:
XP_041718157
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Position
34:44381522..44526173
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AA seq
871 aa
AA seq
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MMEYWRQCALWLINCKVLPLNHRVTWESAQVFDLAQTLRDGVLLCQLLNNLRPQSINLKE
INLRPQMSQFLCLKNIRTFLSACCEMFGMKKSELFEAFDLFDVRDFGKVMDTLSKLSRTT
ISEQTGIKAFPSEESLEEDEDIYNHLEDLIDENGVEDEEDLYDCVYDDEDGGEIYEDLMK
AEAVPPPLSLQKQVETDIRSCCLTEIKQTEEKYTETLESIEKYFMAPLTAFLSSEEMKKV
FVNIPDLVKVHKSLMVEIQDSVCHKSAQNLYQIFINYKERLLIYGTYCSHVETAIVALDD
ICKHREDIRMKLEECAKRANYGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDVADKSNL
RMALDAMKDLAQYVNEVKRDNETLRDIAQYQKSIENLNQSLSIYGRPKGDGEVRVASIDK
RAKQDRHIFLFDAAVIVCKRRGDNYEMKEVIDLHHFKITNNPTSDKENRKWSYGFYLTHN
QGQSGFEFFFKTKELKKKWLEQFGMAISNIRPENGTSNFHEFKMHTFDRITSCSSCHMLL
RGIFNQGYLCSKCGVGAHKECLGRFGGCGKTDPGSFRTQEKSVHGRRSDPGLPKMLVTRN
YFGVPSPICGPPLNIQQGDIIELVCADLHSSWWQGKILTTREVGFFPSDAVKPCPCVPKP
VDYSTQPWFAGPMERLQAEAELINRGNSTYLVRHRSREFTEYAISIKYNNDVKHIKILTR
DGCFHIAENKKFRSILELIEYYKHHSLREGFRSLDTTLQFPYREQENAAMLHTNRPGGNT
PLLCGLTYVTPAGYSFVPPSSAPFWSVFTPKVMGVAIARYDFSSRDTRELSLQEGDVVKI
YTKSGANGWWRGEVSGRVGWFPSTYVEEGEE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtattggaggcagtgcgcgttatggctgatcaactgcaaggtgcttccactc
aaccatagggtaacatgggagtctgcccaggtattcgacctggctcagaccctccgagat
ggcgtgctcctgtgtcagcttctcaacaacctccgaccccagtccatcaacctcaaagag
atcaatctcagaccgcagatgtcacagttcctgtgcttgaagaacatcaggacatttctc
tccgcctgctgtgagatgtttggcatgaagaagagtgaactctttgaggccttcgacttg
tttgatgtgcgggactttggaaaggttatggacacattatccaaactgtcccgcacaacg
atttcagaacaaaccggaataaaggcttttccttcagaggagagtctagaagaagatgag
gacatctataaccacctagaagacctgattgatgagaatggagtggaggatgaggaggat
ctttatgactgtgtctatgatgatgaagatggaggagagatctatgaagatctgatgaag
gctgaagccgtccctcctcctctgtcgttacagaagcaggtagagacggacatcaggagc
tgctgtctgacagagatcaagcagactgaggagaagtacacagagactctggaatccata
gagaagtattttatggcacctcttacggcgttcctgtcctcagaggagatgaagaaagtg
tttgtcaacattccggacctggttaaagttcacaagagtctcatggtggagatccaagac
tctgtctgccataaaagtgctcagaacctctaccagatcttcatcaactacaaagagaga
ttgctaatatatgggacatactgtagccatgtagaaacggccatcgttgctctggatgac
atctgcaaacacagagaggacatccgaatgaagctggaggaatgtgcgaagagagccaac
tatgggaagtttacactgagggatctgctagtggtccctatgcagcgggtactgaagtat
catcttcttctacaggaattagtgaaacacactcacgacgtggctgacaagagcaatttg
cggatggcgctggatgccatgaaggacctggctcagtacgtcaatgaagtgaagagagac
aacgagactctgagagacatagcccagtatcagaaatccatcgaaaaccttaatcagtct
cttagtatctatgggagaccaaaaggagacggagaggtacgcgttgcctcaatcgacaaa
cgtgccaaacaggaccggcatatcttcctgttcgatgctgctgtgatcgtctgtaagagg
agaggagacaactatgagatgaaggaagtgatcgacctgcaccacttcaagatcaccaac
aaccccacgtcagacaaggagaacagaaagtggtcctatggattctacctgacacacaac
caggggcagagtggcttcgagttcttcttcaaaaccaaggagctgaagaagaaatggctg
gagcagtttggcatggccatatccaacatacgtccagagaacggcaccagtaacttccat
gagttcaagatgcacaccttcgacagaatcacatcctgtagctcctgtcacatgctgcta
aggggcatctttaaccaggggtacctgtgctccaagtgtggtgttggagcccataaggaa
tgtctggggaggtttggcggctgtggaaaaacagatccaggctccttcagaactcaggaa
aaatcagtgcacggacggcgatcagatccagggttacctaagatgttggtgaccaggaac
tattttggtgtgccaagtcccatatgtggcccacccctcaacatccagcaaggtgacatc
atcgagctggtctgtgccgatctacacagctcctggtggcagggcaaaattctgacgacg
agagaggttggcttctttccaagcgacgccgtgaagccgtgcccatgtgtccccaaacct
gtcgactactccacacaaccctggtttgctgggcccatggagagacttcaggctgaggca
gaactgatcaacagagggaatagcacctacctggtccgccaccggagccgcgagttcaca
gagtacgccatcagcattaagtacaacaatgacgtgaagcacatcaagatcctgaccaga
gatggctgcttccacatcgcagaaaacaagaagttcaggagtatattagaactaattgaa
tactacaaacaccattcattgagggaaggctttagaagcctggacaccacactgcagttc
ccctacagagaacaggagaatgctgctatgctccacaccaacagacctggaggaaacacc
ccattgctctgtggactgacttatgtaactcctgccggctacagctttgttcctccctcc
tccgctcctttctggtcagtgttcaccccgaaggtgatgggtgtggcgatagcccgctat
gacttcagctccagggacaccagagagctgtctctacaggagggagatgtagtcaagatc
tacaccaagtcaggagccaatggctggtggaggggagaggtcagcggcagggtgggctgg
tttccatctacctatgtggaggaaggagaggagtga
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