Coregonus clupeaformis (lake whitefish): 121550174
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Entry
121550174 CDS
T08357
Name
(RefSeq) ARF GTPase-activating protein GIT2 isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121550174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550174
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121550174
Endosome - Golgi transport
Arf GTPase associated proteins
121550174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Shugoshin_N
TTRAP
T7SS_ESX_EspC
YabA
Motif
Other DBs
NCBI-GeneID:
121550174
NCBI-ProteinID:
XP_041718216
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Position
18:22113804..22152356
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AA seq
811 aa
AA seq
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MSKRLRNSEVCADCSVPEPRWASVNRGVLICDECCSVHRSLGRHSSQVRHLTHTPWPPTQ
LQMVQTLYNNGANSIWEHCLLDPASVMSGKRKANPQDKVHPNKTDFIKAKYQMLAFVHRM
PCRDDDSFTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQV
SQAELLTVYGADPGAPDTNTKTPIDYARQAGYHDLADRLVEIQYELTDRLAFYLCGRKPN
HKNGHHFIVPQMADRNISLDLSELAKTAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVW
LATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDSKRRQL
GNSTTSPKENVELILKSVSSRSGSEGLDNDQPDYDSVASDEDTDKEPPSGKDRTKSLDSE
PSDGPVTVQEFLEVKNALSASEAKIQQLMKVNSNLSDELRLMQKKLQSLQSENTSLRRQG
PTTHIYQVPINSGSEYTDPSSSSPSAMKRQQSARAGRPMSMSIYETGSGLKPYLPKGDTP
YPEEGVPTLQPFLPPHTGRGAFVTSSSLPSFPSTLSWSRDESALRASKLDKQSSMPDSDY
DNTNNDYEMEDSGSMGRRGRLRSSGWLGEGSSIPELDDLGAEPDPALPSTEDVIRKTEQI
TKNIQELLRAAQENKHDRPCERVRRLRHSLGCFSTLVPWAEKAPSPLQPLSLCSPDPAAC
FIPCSERIYVAVTEMAALFSKRPRSEMVRGPLRLLTSSAFRLQGECRKASPPEEGPGPDM
QLVTQQVIQCAYDIAKAAKQLVTITTKENSN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgattaaggaatagtgaggtttgcgcggattgcagtgtcccagagcctcgc
tgggcctctgtgaacaggggcgtgttgatctgcgacgagtgctgtagtgttcatcggagt
ctgggaagacacagctcccaagtacgtcacctgactcacacaccatggcctcctacacag
ctacaaatggttcagacgttatacaacaacggtgcaaattcgatatgggagcactgtcta
ctggacccggcgtcggtgatgagtgggaaacgaaaggccaaccctcaggacaaagtgcac
ccaaacaagacagacttcataaaggccaaataccaaatgctggcttttgtccaccggatg
ccttgtcgagatgacgacagcttcacagccaaggacttaagcaagcaacttcactccagt
gtccgcactggtaacttggagacatgtctgaggttactctctctgggagcccaggccaat
ttctttcacccagaaaaagggaatacgccgctgcatgtggctgccaaggcagggcaggtg
tctcaggcggagctgctgaccgtctacggggccgaccccggagctcccgacactaacacc
aagacccccatcgactatgcaaggcaagctggctaccatgacctggctgataggctggtg
gagatccagtatgaacttactgacagactggcattctatctctgtgggagaaagcctaat
cataaaaatggccatcacttcatcgtcccacagatggccgacaggaacatcagtttagat
ttatcagaactggcaaagacggcaaagaagaaactccagtctctcagtaatcatttattt
gaggagctggcgatggacgtgtatgacgaggtggaccgaagggagacggatgcagtatgg
ctggcgacgcagaaccacagtaccctggtgacagagaccacagtggtgcctttccttcct
gtgaacccagagtactcatcaacacgaaaccagggacggcaaaagcttgcgagattcaac
gcacatgaatttgcaactcttgtcatcgacatattaagtgactcgaaacgtcgacagctg
gggaactcgaccacaagtcccaaagaaaatgttgaacttatcctaaaaagtgtgagcagc
cggagtggcagcgagggtctggacaacgaccaaccagattacgacagcgtggcctctgac
gaggacacggataaggagccaccctcgggcaaggaccggaccaagagtctggactcggaa
ccgtcagacgggcctgtcacggtgcaggagttcctggaggtgaagaacgctctgtccgcc
tcggaggccaagatccagcagctgatgaaggtcaacagcaacctgagcgacgagctgcgg
ctgatgcagaaaaagctgcaatcgctgcaaagtgagaacacgtctctcaggcggcagggc
ccaaccacccatatctatcaggtccccatcaacagcgggtcagagtacactgacccttct
tcctccagcccctcggccatgaagcgccagcagtcagcgcgtgcaggtcggcccatgtcc
atgtctatttatgagactggctcaggcctgaagccctacctccctaagggggacaccccc
tacccagaggagggtgtccccaccctgcaacccttcctcccacctcatacgggaaggggc
gcttttgtgacctcttcatccctcccctccttcccatccaccctgtcctggtctcgggac
gaaagtgctctaagggcctccaagctggacaagcagagcagcatgccagacagtgactat
gacaacacaaacaatgactatgagatggaggactctggcagtatgggcaggcgggggagg
ctgaggagcagtggttggctgggggagggcagctccatccctgagctggacgacctgggg
gcagagccggacccagcgcttcccagcactgaggatgtcatccgcaagacggagcagatc
accaagaacatccaggagctgctccgcgccgcgcaggagaacaagcacgacagaccttgt
gagcgtgtgcgccggctcaggcacagtctgggctgtttcagcaccctggtgccctgggct
gagaaggccccctctcccctgcagcccctcagcctgtgctcccccgatcctgccgcctgc
tttataccctgctccgaaagaatatatgtggctgtgacggagatggccgctctcttttcc
aagagaccacgttcggagatggtgagaggccccctgcgcctgttgacgtccagcgccttc
cggctccagggtgagtgtcggaaggcatcgccccccgaggaaggcccagggcccgacatg
cagctggtcacccagcaggttatccagtgtgcctatgacattgccaaagctgccaagcag
ctcgtcaccattaccaccaaggagaacagcaactga
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