Coregonus clupeaformis (lake whitefish): 121550177
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Entry
121550177 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121550177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121550177
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121550177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
AAA_33
Prot_ATP_ID_OB_C
TIP49
AAA_18
Mg_chelatase
RNA_helicase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
121550177
NCBI-ProteinID:
XP_041718237
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Position
2:777163..781763
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AA seq
433 aa
AA seq
DB search
MPDYLGGDQRKIKDVKEEEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQNLLKKI
NELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFA
KFVVDLSDQVAPTDIEEGMRVGVDRNKXIHIPLPPKIDPTVLVMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccagattatttgggaggcgatcaaaggaaaatcaaagatgtcaaagaagaggaggat
aaacctatcagatctttggatgaaggagacattgccttattgaaaacttatggccagagc
acctactccagacagattaagcaagtggaagatgacatccaaaacctgctcaagaagatc
aatgaactaaccggcattaaggaatcggacactggcctggctcctcctgcactatgggat
ctggctgcagacaaacagactctgcagagcgagcagcctctgcaggtggcaagatgcaca
aagatcatcaacgctgactctgaagacccaaagtacataatcaatgtgaagcagtttgcc
aagtttgtggtggacctgagtgaccaggtggcccccactgacatagaggagggtatgaga
gtcggtgtggatagaaacaaanagatccacattcctctgcctcccaagattgaccccact
gtactagtgatgcaggtggaggagaagcctgatgtgacctacagtgacgtgggtggatgt
aaagagcagattgagaagctcagggaggtggtggagaccccactgctccaccccgagagg
tttgtcaatctgggtattgaaccccccaagggggtgctgctgttcggcccgcccggcaca
ggtaaaaccctgtgtgccagagccgtggccaaccggaccgatgcctgcttcatcagggtc
atcggctcagagctggtccagaaatacgttggagagggtgccagaatggtgcgggagctt
ttcgagatggccaggaccaagaaggcgtgcctcatcttcttcgatgaaattgacgctatt
gggggggcccgttttgacgacggagccggtggggacaatgaggtccagagaaccatgctg
gagcttatcaaccagctggacggcttcgaccccagggggaacataaaggtcctgatggcc
accaaccggcccgacaccctggaccctgccctcatgaggcccgggcgactggacaggaag
attgagttcagcctgccagacctggagggtcgtactcacatcttcaagatccacgcccgc
tccatgagcgtagagcgagacatccgcttcgagctgctggctcgtctctgtcccaacagc
acaggtgccgagattcgcagcgtgtgcacggaggcgggcatgttcgccatccgcgcccgc
cggaagattgccacagagaaggacttcctggaggcggtcaacaaggtcatcaagtcctac
gccaagttcagcgccaccccgagatacatgacctacaactaa
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