Coregonus clupeaformis (lake whitefish): 121550190
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Entry
121550190 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121550190
00071 Fatty acid degradation
121550190
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121550190
03320 PPAR signaling pathway
121550190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121550190
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121550190
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121550190
BRITE hierarchy
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Ortholog
Paralog
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Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
121550190
NCBI-ProteinID:
XP_041718253
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Position
18:18584800..18596993
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AA seq
774 aa
AA seq
DB search
MSEQEDSIVTNGVPVVEKSSESCVSDIPLGETEQLPPVAKLQQNRNHSSPLINGGVVDHP
QPNSESESDGECKDSQETAAVEPAVITPSSIPEVPAKPPRSPGLEGPQWDPLSGASVPLK
LSDVSLAPAEQLWCTSRDQAVKLRMTETGPGSEAPMTVHQMFLETVESYGDLPALASKKD
GQWVTLTWREYYQQCRVAAKSFLKLGLERYHGVGILGFNSPEWFISDIGCILAGGFAAGI
YTTNSPEACLYVADNCEANVLVVENHKQLLKILQIKDQLPHLKAIVQYKDELQQKLPNLY
TWAEFMKLGEEVSDEQLNAVVDSQRANQCCTLIYTSGTTGKPKGVMLSHDNITWTSNAAG
TMPDLKHGEEVVVSYLPLSHVAAQVNDMWIAMRFAGATYFAEPDALKGSLGNTLKEVRPT
SFLGVPRVWEKMQEKMKAIGAKSSGMRKRVADWAKSIGLQASYSAMNGENLLPWGFMLAN
NLVFKKVRWAMGLDRCRNCLTGAAPITKETLEYFMSLSLPLYELYGMSESTGPHTISWEN
NFKIMSCGKVVIGCQTKLDKPDEDGNGEICFWGRHVFMGYLNEPEKTEEALDQEGWLHSG
DLGKHDKDNFLFITGRIKELIITAGGENIPPVPIEDAVKAETAIISNAMLLGDKLKFLSM
MLTLKCVVDDNGDPTDELTPEALAFCQQRGVVATKASEIIASKEPAIYKAIQEGIERVNA
KAPSNAQRVQKWFILDRDFSISGGELGPTMKLKRGVVVKMFQEKINAIYGMPQE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagaggattccattgttaccaatggggttcctgttgtagagaagagttct
gagagttgtgtgagtgacattcctcttggcgaaaccgaacagttaccaccagtcgccaaa
ctccaacagaacagaaaccactcgagtcccctcatcaatggtggagtagtggaccatcca
cagccaaactctgagtcagagtcagatggagagtgcaaagacagccaggagacagctgct
gtagaacctgcagtgataaccccatcaagcatacctgaagtaccagccaaaccacccaga
tcacctggactagagggacctcaatgggatcctctctcaggtgcctcggtgcccctgaag
ctgtcggatgtgtctctggccccagcggagcagctctggtgcacctccagggaccaggcg
gtcaagctgaggatgaccgagacagggcctggctccgaggcccccatgaccgtccaccag
atgttcctggagacggtggagagctatggagacctgcctgcactggcatctaagaaagac
gggcagtgggtcaccctgacctggagggagtattaccagcagtgccgagtggcggccaag
agcttcctcaagttgggactggagcgttaccatggtgtcggtattctgggctttaactct
ccagagtggttcatctcagacattggctgtatcctggctgggggctttgctgccggcatc
tacaccaccaactcccccgaggcatgtctgtatgtagcagacaactgtgaggccaacgtc
cttgtggtggagaaccacaaacagctcctcaaaatcctccagattaaggaccagcttcca
cacttgaaagctatcgttcagtacaaggatgaactgcaacagaagctgccaaacttgtac
acttgggctgagtttatgaagctgggtgaagaggtgtctgatgaacagctgaatgctgtg
gtggacagtcagagggctaaccagtgttgtacgctcatctacacctctggaaccacaggc
aaacccaaaggggtcatgctgagtcatgacaatatcacctggacttcaaatgcggcgggc
accatgccagatctgaaacatggtgaggaggtggtggtgagctacctgcccctgagccat
gtagctgcccaggtcaacgacatgtggatcgccatgagattcgcaggggcgacgtatttc
gcagaaccagacgccctgaagggctctttggggaatacactgaaagaggtgcgccccacc
agtttcctgggagttccccgtgtgtgggagaagatgcaggagaagatgaaagccattggt
gccaagtcctctggtatgaggaaaagagtggcagactgggctaaatccatcggattgcaa
gccagctacagtgccatgaatggtgagaacctgttgccctggggcttcatgctggcaaac
aacctggtgtttaagaaggttcgctgggccatgggcctggaccgctgcaggaactgctta
acaggagcagcacccatcactaaggagaccctggagtacttcatgagccttagcctcccc
ttgtatgagctttatgggatgagtgaaagcaccggccctcacaccatctcctgggagaat
aacttcaagatcatgagctgtggaaaggtggtgattggctgccagacaaagttagacaag
ccagacgaggatgggaatggtgagatctgtttctgggggcgtcatgtgttcatgggctac
ctgaacgagccagaaaagactgaggaggccctggaccaggagggctggctgcactctgga
gacctgggcaagcacgacaaggacaacttcctgttcatcacagggaggataaaggagctg
atcataacagcaggaggggagaatattccacctgtgcccattgaggatgcagtgaaagca
gagaccgccatcatcagcaacgccatgttgctcggagacaagctgaaattcctctccatg
atgctcacgctcaaatgtgtagtcgacgacaatggcgatccgacggacgagctgactcca
gaggccttggcgttctgccagcagcgtggcgtcgtggcaaccaaggcctctgagattata
gccagtaaggagccagctatttacaaggccattcaggagggcatagagcgcgtgaacgct
aaggccccctccaacgcccagagggtccagaagtggtttattttggacagagatttctcc
atatccgggggagaactgggacctaccatgaaactaaagaggggggttgttgtcaaaatg
ttccaggagaaaatcaacgctatttatggaatgccacaagaataa
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