Coregonus clupeaformis (lake whitefish): 121550195
Help
Entry
121550195 CDS
T08357
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121550195
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121550195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
121550195
NCBI-ProteinID:
XP_041718261
LinkDB
All DBs
Position
18:complement(22979378..23034487)
Genome browser
AA seq
1231 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLELSVKTEKPANKSLS
RLEEHEKEVVSALRYFKTVIDKMVVDKKVLEMLPGSASKVLEAILPLVQVDPRIQHSSAV
SSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTIVIKAVLDGVKELVKLTIEKQE
HPSPTSPVKPVPPAALTESAAEPPAKEKESLDKSAATTQSTEVLTEPTEEEAEEVAPPKP
PLPGVKMSEHNPPALPPKKRQSAPSPTRVAVVAPMSHATSGSSLPMGIGLHKQEYEVDAL
QRRFSGGSRSYGGESPRLSPCNSMGKLSKSDEQLSWTVDSGQCSRNTSCETLDTTDHYDP
DYDFLHQDLSSLEQMPSLPVGGCLSPLPESHSESSSPSPCPGPVPPLAQPHFSPAYPSPS
PQPSLQGSSMSPLYSRMTPALPPPALPEKKRRSGACSGLSDGSYSGSSWRVSFERHPSQY
DNLMEDDMPPVPPFPLFTPGVSPMTLCHAADGFVSEFSASETADVPQSPPPLPEKKSRHI
LKYMQFVEDYSEPQPSVFYQTPQSESIYEQRNKRFQEVYGFNDSYSSSDSVHEPLPPPAL
PPKQRQLASHSASPSSSSSSSLSCHLQQSQAAVVEEAGSALSMSVSNSFLSRQASSTTPM
HKTIIRSYSQDFAPLCQSSIPYLLSSVSSHSPIVHQSQSMDLAAPGTGSPDPVLVANGSL
DSSGGSLAVCLPTDSSFSDTRQTSLSESANEEVGEGEYVNLYSSSQANGDGPLSRRDSSA
IDDSLEDTASDNPLCNNKDMCNDSRRQKSSEEGPSSEETDELSLIDHMEIMSRITLKQES
DDGPDVRAGTGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTRFSHS
PDTFKKRVSKNTFFVLVRVVDELCLVEMTEDILKQLMDLVFRLVCNGELSLARVLRKNIL
DKVEQRKLLRYTHSLRPLAARGVAARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLL
WAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIILQEKAQDREKLLLKFIKIMKHLRKLNNF
NSYLAILSALDSAPIRRLEWQKTTSEGLEEYCTLIDSSSSFRAYRAALADVEPPCIPYLG
LILQDLTFVHLGNPDLINGKVNFSKRWQQFNILDSMRRFQQVHYDLKHNDDIVSFFNDFS
DHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaagcaagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggacaccctcaaagaaagtc
agtaagccacctttagaacttagcgtgaagacggaaaaacctgctaacaagagtctgagt
cggttagaggagcatgagaaagaagtggtcagtgccttgcgttacttcaagaccgtcatt
gacaagatggtggtggacaaaaaggtgctggagatgttacccgggtctgccagtaaggtc
ctggaggccatcctgcctttagtccaagtggatccaaggatccaacacagctcagcggtg
tcctcttgtctgaaccgtgtgtaccagagtctgggcaatctcatccgctggtccgaccaa
gtcatgctggagggggtcaacctggaagataaggaaaccatcgttaccgtcaccattgtg
atcaaggcagtgctcgacggtgttaaggagctggtgaaactgaccatagagaaacaggag
catccttcccccacgtctcctgtcaaaccagtgccaccggctgccctgactgagagtgct
gcagagccacctgccaaggagaaggagagtctggacaagagcgcagccacgacccaatct
acggaagtcttgactgaacccactgaggaggaagcagaggaggtggccccaccaaaaccc
cctctccctggcgtaaagatgtctgaacacaatcctccagctctccctccaaagaagcgc
cagtcggccccctcccccacccgggtggcagtggtggcccccatgagccacgccaccagt
ggctccagtcttcccatgggcatcggcctccacaaacaggagtacgaggtggacgcgttg
cagcggcgcttctcagggggcagccgttcgtacggaggggagtcgccgcgcctgtcgccc
tgcaacagcatgggcaagctgagcaagtcggacgagcagctgtcctggacagtggacagt
ggacaatgttcacgcaacaccagctgtgagactctggacaccacagaccactacgacccg
gactacgacttcctccaccaggatctgtccagcctggaacagatgccttccctgccggtg
ggggggtgcctcagccccctgcccgagtcccacagcgagtcctcctccccctccccgtgc
cctggccccgtcccaccactggcccaaccccacttcagccctgcttacccctccccctcc
ccccagccgtctctccagggctcctccatgtcccccctctactcccgcatgactcccgcc
ctgccgccccccgccctgccggaaaagaagcgccgcagtggcgcctgctcgggcctctcc
gacggctcctactcgggctcctcctggcgcgtctccttcgagcgtcacccgtcccagtat
gacaacctcatggaagacgacatgccgcctgtgcctcccttccccctgttcacgcctggc
gtctcgcccatgaccctgtgccacgccgccgatgggtttgtgtctgagttcagtgccagc
gagacggcagacgtcccccagagtccacccccactcccagagaagaagagccgccacata
ctgaagtacatgcagtttgtggaggactactcggagccccagccctcagtgttctaccaa
acaccgcagagcgagagcatctacgagcaacgcaacaagcgcttccaggaagtctacggc
ttcaacgactcgtatagcagcagcgactctgttcacgagcccctcccacccccggcactg
ccacccaaacagaggcagctggcctcccattcagcgtctccctcttcctcgtcctcatcc
tctctctcctgccacctccagcagtcgcaggctgcggtggtggaggaggcggggtctgcg
ctcagcatgtccgtctctaactccttcctgagccgccaggcctcctcgaccacccccatg
cataagacaattatccggtcctattctcaggactttgcgcctctctgccagtcttccatt
ccatatctcctctcatctgtctcttcccactctcccattgtccaccaatcgcagagcatg
gacctagctgccccaggcactggcagccctgaccctgtgctggtggccaacggctcactg
gacagctctggtggctctcttgcagtctgccttcccactgactcttctttctctgacact
cgtcaaacctctttgagtgaaagcgctaatgaggaagtcggggagggagagtacgtcaat
ctgtactcatccagccaagccaacggagacgggccgctctcccgccgagactcgtccgcc
atagatgactcgctggaggacactgcctcagataacccactgtgcaataacaaggacatg
tgcaatgacagccgaaggcaaaagtcctcagaagaagggccgagtagcgaggagacggat
gagctttccctcatcgatcacatggagatcatgtcccggataacactgaagcaagagagc
gacgacggtccagatgtccgagccggaacgggggatattttattagtccacgccacagaa
acagaccgcaaagatcttgtcttatactgtgaggctttcctgacaacgtacagaacattt
ataacccccgaggatctcatcaaaaagctgcactacagatacaccagatttagtcacagc
ccagacaccttcaagaagagagtcagcaaaaacaccttcttcgttctggtccgtgtggtg
gacgagctgtgtctggtggagatgacggaggatattctgaagcagctgatggacttggtg
ttcaggctggtgtgtaacggtgagctgagcctggcccgcgtgctccgcaagaacatcctg
gacaaggtggagcagaggaagttgctgcgctacacccactccctcagaccactggccgcg
cgaggtgtcgctgccagaccggggaccctgcatgatttccgcagtcacgagattgctgac
cagctaactctcctggacgcagagctcttctacaaaattgagatccctgaggtgttgctt
tgggctaaggagcaaaatgaggagaagagtcccaacctcacacaattcacagagcacttt
aacaacatgtcctactgggtacgctccataatcattctgcaggagaaagcccaggaccga
gaaaagctcctccttaaattcatcaaaataatgaagcacttacggaagctaaataatttc
aactcgtatttggcaatattatctgccttggattcggctccaatccgaagactggaatgg
cagaaaacaacctcagagggcctagaggaatactgcacgttaatagatagttcctcctcg
ttcagggcctaccgagcggcactggcagacgtggaacccccatgtataccatatctgggt
cttatcctccaggacttgacctttgtccatctgggcaaccctgacctcatcaatgggaag
gtcaacttctcaaagcgctggcagcagttcaatatcctggacagcatgaggcgcttccag
caagtgcattatgatctgaaacacaacgacgacatcgtctccttcttcaatgatttcagc
gaccacctggcagaggaggctctgtgggagctgtctctgaagatcaaacctcggaacatt
acgcggcgcaaaacagaacgcgaagagaagacatag
DBGET
integrated database retrieval system
