Coregonus clupeaformis (lake whitefish): 121550220
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Entry
121550220 CDS
T08357
Name
(RefSeq) leucine-zipper-like transcriptional regulator 1 isoform X4
KO
K23330
leucine-zipper-like transcriptional regulator 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121550220
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121550220
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_1
Kelch_5
BTB
Kelch_6
Kelch_2
NANM
BACK
BACK_BPM_SPOP
RAG2
Motif
Other DBs
NCBI-GeneID:
121550220
NCBI-ProteinID:
XP_041718311
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Position
18:22711839..22721299
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AA seq
844 aa
AA seq
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MTNSVSANSSSNCISIIPGWVAFDLEGTVLLWTAKKRLVGCDGHVTMSCKSTKVAPSVDF
DHSCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYRDAIYVFGGDNGKN
MLNDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKN
DLFEYKFATGQWTEWKVEGSLPVARSAHGATVYSDKLWIFAGYDGNARLNDMWTISLQDR
EHACWEEIEQSGEIPPSCCNFPVAVCRDKMFVFSGQSGAKITNNLFQFEFKGHMWTRIPT
EHLLRGSPPPPQRRYGHTMVAFDRHLYVFGGAADNTLPNELHSYDVDSQTWEVIQPSLDS
EDPLGNEMTSSQGSILMPSGRLFHAAAVIQDAMYIFGGTVDNNVRSGEMYRFQFSCYPKC
TLHEDYGKLFENRQFCDVEFILGEREERVLGHIAIVTARCQWLRKKILQARDRQRQRIKQ
QENSEEGGEEGAGAGGPRDIPGGTRASGNQPMLEVHIREAEAQPFEVLMQFLYTDKIQYP
RRGHVQDVLLIMDVYKLALSFKLSRLEQLCVQYIEASVDLQNVLSVCEQANKLQLDQLKE
HCLNFVVKETHFNQVIMTKEFEHLSTPLIVEIVRRKQQPPPRVYSDQPVDIGTSLVQDMK
AYLEGGGLDFCDIVLLLDGHPRPAHKAILAARSSYFEAMFRSFMPEDGQVNISIGEMVPS
KQAFESMLRYIYYGDVNMPPEDSLYLFAAPYYYGFSNNRLQAYCKQNLEMNVTVENVLQI
LEAADKTQAWDMKKHCLHIIVHQFIKVSKLPNLRSLSQLLLLDIIESLASHISDKQCAEM
GSDI
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacagtgtatctgcaaattcatctagcaattgtatcagcataatcccagggtgg
gtggcttttgacctagagggcacggtcttgctatggacagctaagaagagattggttgga
tgtgatggtcatgtaacgatgtcttgtaaatccaccaaagtcgcaccaagtgttgatttc
gaccatagctgctcggacagtgtggaatatttgacacttaattttggcccattcgagact
gtccatcgctggagaaggctcccaccgtgtgatgagtttgtcggtgccagacgcagcaag
cacaccgttgtggcatacagggatgccatatatgtattcgggggagataatgggaaaaac
atgctgaatgacttgttgcgcttcgatgtgaaagactgctcatggtgccgagccttcacc
accggcacaccacctgcacccaggtatcaccattctgccgtggtgtatggcagcagcatg
tttgtgtttggaggctacactggcgatatctactcaaactccaatctgaaaaacaaaaat
gacctttttgagtacaagtttgcaacaggacagtggacggagtggaaagtggagggcagt
ttgcctgtggccaggtcagcacatggtgccacagtgtacagtgataagctatggatattt
gctggctacgatggaaatgccaggttaaatgacatgtggaccatcagtcttcaggaccga
gagcatgcttgttgggaggagattgaacagagcggtgagatccctccctcctgctgcaac
ttccctgtagccgtgtgcagggacaagatgtttgtgttctccggccagagtggagctaag
atcaccaacaacctcttccagtttgagttcaagggccacatgtggacgcgcatcccgacc
gaacacctgctgcggggctcccccccgcccccccagaggcgctatggccacaccatggtt
gccttcgaccgccacctgtacgtgtttggaggcgcggccgacaacacgctgcccaatgag
ctgcactcctacgacgtggactcccagacctgggaggtgatccagcccagcctggacagt
gaggatccccttggaaacgagatgacctcatctcaagggtcaattctgatgcctagtgga
agactgttccatgcggccgctgtgatccaggatgccatgtacatctttgggggaacggtg
gacaataatgtgcgcagcggggagatgtacagatttcagttttcttgctacccaaagtgc
acgctccacgaggactacggcaagctgtttgagaaccgtcagttctgcgatgtggagttc
atcctgggagagagggaggagagagtcctgggtcatattgccattgtgactgcaagatgc
cagtggctgagaaagaagatcctgcaggcccgggatagacagagacagaggattaaacaa
caggagaacagtgaggaggggggcgaggagggggcgggggccggaggtcccagggatatc
ccagggggcaccagggcgtcagggaaccagcccatgctggaggtgcacatcagagaggcc
gaggcccagcccttcgaggtgttgatgcagttcctgtacacagacaagatccagtacccg
cgcagaggtcacgtccaggacgttctgctcatcatggatgtctacaagctggcgctgagc
ttcaagctatcgcggctggagcagctgtgtgtgcagtacatcgaggcgtcggtggacctc
cagaacgttctgagcgtgtgcgaacaagccaacaagctacagctggatcagctcaaggag
cactgtcttaactttgtggtgaaggagactcactttaaccaggtgatcatgaccaaggag
tttgagcacctgtccacccctctgatcgtggagatagtccggcggaagcagcagcctccc
cccagggtgtactcggatcagcccgtggacatcggcacctccctggtgcaggacatgaag
gcctacttggagggcggcggcctggacttctgtgacatcgtcctgctgttggacggacac
ccgcggcccgcccataaagctatactagctgcccgctcaagctactttgaggcgatgttc
cgttccttcatgcccgaggatggccaggtgaacatctctatcggtgagatggtgcccagc
aagcaggcctttgagtccatgctccgctacatctactatggcgacgttaacatgcctcca
gaagactctctctacctgttcgcagcaccatattactatggtttctccaacaacaggcta
caggcctactgcaagcagaacctggagatgaatgtgacggtggagaacgtcctccagatc
ctagaggcggcggacaagacccaggcctgggacatgaagaagcactgcctgcacatcatc
gtccaccagttcatcaaggtgtccaagctccccaacctgaggtccctcagccagctgctg
ctgctggacatcatcgagtcccttgcctcacatatatcagacaagcagtgtgcagagatg
ggctccgacatctag
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