KEGG   Coregonus clupeaformis (lake whitefish): 121550227
Entry
121550227         CDS       T08357                                 
Name
(RefSeq) cyclin-H-like isoform X1
  KO
K06634  cyclin H
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022  Basal transcription factors
cclu03420  Nucleotide excision repair
cclu04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121550227
  09124 Replication and repair
   03420 Nucleotide excision repair
    121550227
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121550227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121550227
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121550227
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121550227
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121550227
Motif
Pfam: Cyclin_C_2 Cyclin_N NADPH_Ox HTH_26
Other DBs
NCBI-GeneID: 121550227
NCBI-ProteinID: XP_041718327
LinkDB
Position
18:complement(15432246..15443043)
AA seq 324 aa
MFHISSQKKFWTFDNEESLEQLRYEANQKYRNKMFASGKPGVSDALFLEAHEENVLFRHY
EKRLLDFCNAFKPVMPKSVVGTAIMYFRRFYLNNSLMEYHPRTIMRICAYLSCKVDEFNV
SSTQFVGNLVQESAAGQERALEQILEYELLLIQQLNFHLVVHTPYRPMEGLLIDLKTRYP
LLENPESLRKSVDDFLTRATLTDSGLLFPPSQIALTAILNSASRAGLSMESYLTECMGLK
EDKETLLKMYDAMRRIKSLMKKYELPKPDEVNAYKVKLERVHADFGTNSNAKRKRGYEDD
DHVAKEPRMTEEEWTDEDLDLDEL
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtttcacattagctcacagaaaaagttctggacattcgacaatgaagaaagtctggaa
caactgagatatgaagccaaccagaaatatcgcaacaaaatgtttgccagtgggaagcct
ggggttagtgatgccttgttcctggaggctcacgaggagaacgtccttttcagacactat
gagaagagactccttgacttctgtaatgctttcaaacctgtgatgcccaagtctgttgtg
ggtacagctatcatgtatttccggagattttacctgaacaactcactgatggaataccac
cctagaacaatcatgcggatctgtgcctacctgtcctgtaaggtggatgagtttaacgtg
tccagcacccagtttgtggggaatcttgtgcaggagagtgcggccgggcaggagagggct
cttgaacagattttggagtatgagctccttctcattcagcagctcaacttccacctggtg
gtgcacaccccctacagacctatggagggcctgctcatagacctcaagacaaggtaccct
cttctggagaacccagagtctctgaggaagagcgttgatgacttcctgacacgggccacc
ctgacggacagtgggctgctgtttcccccatctcagatcgccttgacggccattctgaac
agtgcgtcgcgggccggcctcagcatggagagctatctgacagaatgtatgggactgaag
gaggacaaagagaccctcttaaagatgtacgatgcgatgagacggataaaaagtctcatg
aaaaagtatgaacttccgaaaccagacgaggtgaacgcttacaaagtgaaactggagagg
gtccatgctgactttggcacaaactccaacgcgaaaagaaagagaggatatgaggatgac
gatcatgtagcgaaagagccccgaatgacagaggaggagtggactgatgaagatctggat
ttggatgaattatga

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