Coregonus clupeaformis (lake whitefish): 121550227
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Entry
121550227 CDS
T08357
Name
(RefSeq) cyclin-H-like isoform X1
KO
K06634
cyclin H
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
cclu03420
Nucleotide excision repair
cclu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121550227
09124 Replication and repair
03420 Nucleotide excision repair
121550227
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121550227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121550227
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121550227
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121550227
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121550227
BRITE hierarchy
Motif
Pfam:
Cyclin_C_2
Cyclin_N
NADPH_Ox
HTH_26
Motif
Other DBs
NCBI-GeneID:
121550227
NCBI-ProteinID:
XP_041718327
LinkDB
All DBs
Position
18:complement(15432246..15443043)
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AA seq
324 aa
AA seq
DB search
MFHISSQKKFWTFDNEESLEQLRYEANQKYRNKMFASGKPGVSDALFLEAHEENVLFRHY
EKRLLDFCNAFKPVMPKSVVGTAIMYFRRFYLNNSLMEYHPRTIMRICAYLSCKVDEFNV
SSTQFVGNLVQESAAGQERALEQILEYELLLIQQLNFHLVVHTPYRPMEGLLIDLKTRYP
LLENPESLRKSVDDFLTRATLTDSGLLFPPSQIALTAILNSASRAGLSMESYLTECMGLK
EDKETLLKMYDAMRRIKSLMKKYELPKPDEVNAYKVKLERVHADFGTNSNAKRKRGYEDD
DHVAKEPRMTEEEWTDEDLDLDEL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacattagctcacagaaaaagttctggacattcgacaatgaagaaagtctggaa
caactgagatatgaagccaaccagaaatatcgcaacaaaatgtttgccagtgggaagcct
ggggttagtgatgccttgttcctggaggctcacgaggagaacgtccttttcagacactat
gagaagagactccttgacttctgtaatgctttcaaacctgtgatgcccaagtctgttgtg
ggtacagctatcatgtatttccggagattttacctgaacaactcactgatggaataccac
cctagaacaatcatgcggatctgtgcctacctgtcctgtaaggtggatgagtttaacgtg
tccagcacccagtttgtggggaatcttgtgcaggagagtgcggccgggcaggagagggct
cttgaacagattttggagtatgagctccttctcattcagcagctcaacttccacctggtg
gtgcacaccccctacagacctatggagggcctgctcatagacctcaagacaaggtaccct
cttctggagaacccagagtctctgaggaagagcgttgatgacttcctgacacgggccacc
ctgacggacagtgggctgctgtttcccccatctcagatcgccttgacggccattctgaac
agtgcgtcgcgggccggcctcagcatggagagctatctgacagaatgtatgggactgaag
gaggacaaagagaccctcttaaagatgtacgatgcgatgagacggataaaaagtctcatg
aaaaagtatgaacttccgaaaccagacgaggtgaacgcttacaaagtgaaactggagagg
gtccatgctgactttggcacaaactccaacgcgaaaagaaagagaggatatgaggatgac
gatcatgtagcgaaagagccccgaatgacagaggaggagtggactgatgaagatctggat
ttggatgaattatga
DBGET
integrated database retrieval system