Coregonus clupeaformis (lake whitefish): 121550325
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Entry
121550325 CDS
T08357
Name
(RefSeq) RNA-binding protein FUS isoform X1
KO
K13098
RNA-binding protein FUS
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121550325
09122 Translation
03015 mRNA surveillance pathway
121550325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121550325
Spliceosome [BR:
cclu03041
]
Complex A
Other components
Complex A specific factors
121550325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
RRM_1
Kazal_1
Motif
Other DBs
NCBI-GeneID:
121550325
NCBI-ProteinID:
XP_041718483
LinkDB
All DBs
Position
35:complement(14103672..14133405)
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AA seq
545 aa
AA seq
DB search
MASNDYPPTAAQGYGSYGGGQASQSGYSQSSAQQGYGSGGSYNQSSEGNSASYGQGGYGS
NYGQSQSGGCGSQPPSQGGQSYSSGGYNSSSSSSQPPQSGYNQQSSYSGYGQQQSAAAQS
STSSYGNNSQPSNYGQQPPQSGGGGSYGSQSGGGGGYGGSGGGQSGACGGQQKPGGAPYS
QAPSYSSPPPQSYGQQTKYSQGGGGYRGNSPPMGGGGGGGYGGSDGGYGESGVRGRGERG
GGFRGRGDGDRGFDRGVGPRGTGGMGMGDRGGFNKFGGPRDQGPGGPSSMEDQDNSDNNT
IFVQGMGDGYTVDSVADFFKQIGIIKINKKTGLPMINLYTDRETGKLKGEATVSFDDPPS
AKAAIDWFDGKDFKGNPIKVSFATRRADFGVGRGGGGGMRGGRGRGGEAEFGGPMGRGGF
GGGRGGGGFSGDNGGRGNGGQQRAGDWKCSNPVCGNMNFSWRNECNQCKSPKPEGADGGM
SPMDGGRGFGGDRGGRGGFDRGGFRGRGGDRGGFRGGPGGDRGGFGPGKMDGRGEHRQDR
RDRPY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatgattaccctccgactgcagcccagggctatgggtcctatggtggtggc
caggccagccagagtggctacagtcaatcgtccgcccagcagggctacggcagcggtgga
agctacaaccagagctctgagggcaactctgcctcctatggccagggaggctacggctct
aactacggccagtcgcagtcaggaggatgtggttctcagcctccatcccagggcggtcag
tcctacagctctgggggctacaacagtagtagtagtagtagtcagccaccacagagcggc
tacaaccagcagtcgtcctactctggatatggacaacagcagtctgctgctgcacagtct
tctaccagtagctatggcaacaactcccagccctctaactacgggcagcagccaccgcag
agtgggggtgggggaagctacgggagccagagcggaggtggaggtggctatgggggcagt
ggcggtggacagagtggggcttgcgggggccagcagaagcccgggggggctccctacagc
caggcccccagttacagctcacctccaccccagagctacggccagcagaccaagtacagc
caggggggtggagggtacagaggtaactcgccaccaatgggaggaggtggtggaggaggg
tatggtggctcggacggaggctatggagaaagtggcgtgcgaggccgtggagaaagggga
ggcggctttagaggtcgtggggatggtgaccggggattcgaccgaggtgtcggacctaga
ggcacaggcggcatgggaatgggcgatcgtggaggattcaataagtttggtggaccaaga
gaccagggacctggtgggcccagctccatggaagatcaggataactctgacaacaacacg
atcttcgtgcaaggcatgggagacggctacaccgttgattctgtggctgacttcttcaag
cagataggcatcatcaagatcaataagaagactggtctgcccatgatcaacctgtataca
gacagagagacagggaagctgaagggcgaggccaccgtgtcctttgacgaccccccttct
gccaaagctgccatcgactggtttgatgggaaggacttcaaagggaaccccatcaaggtg
tcctttgcgacccgcagggcggatttcggagtaggccggggtgggggtggcggcatgaga
ggtggccgaggacgaggaggtgaggcagagtttggtgggccgatgggtcgtggcgggttc
ggaggcggtagaggtggtggtggtttctctggcgacaacggtggccgtggcaatggagga
cagcagagagctggagactggaagtgttccaacccggtgtgtgggaacatgaacttttcg
tggaggaacgagtgtaaccagtgcaaatcccccaaaccagagggggccgacggtggcatg
tctcctatggatggaggcagaggtttcggtggagacagagggggtcgtgggggttttgac
cgcgggggattccggggccgagggggtgacagaggtgggttccgaggcggacccggaggc
gaccggggtggattcggaccgggcaagatggatggaaggggtgaacacagacaggaccgc
agagacaggccctactag
DBGET
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