Coregonus clupeaformis (lake whitefish): 121550329
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Entry
121550329 CDS
T08357
Name
(RefSeq) ras-related protein Rab-35
KO
K07876
Ras-related protein Rab-35
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121550329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121550329
04031 GTP-binding proteins [BR:
cclu04031
]
121550329
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121550329
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121550329
Exosomal proteins of other body fluids (saliva and urine)
121550329
Exosomal proteins of colorectal cancer cells
121550329
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
121550329
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
FeoB_N
RsgA_GTPase
Gtr1_RagA
PduV-EutP
SRPRB
ORC_WH_C
TniB
Dioxygenase_N
AAA_29
Motif
Other DBs
NCBI-GeneID:
121550329
NCBI-ProteinID:
XP_045077305
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All DBs
Position
7:34506952..34512822
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AA seq
211 aa
AA seq
DB search
MAGPGKDYNHLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVDIDGERV
KLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEITQNCDNVCKIL
VGNKNDDPSKKQVDSQDAMCFGESVGVRVFETSAKENINVEEMFMAFTHMVLRTKKQSQS
RAEREREREKETVDINSHRHRERRKRGKKCC
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgggaaaggactacaaccatctcttcaaactgctcatcattggagactcc
aatgtagggaaaagcagtctactattacgatttgcagataactccttctctggtagctac
atcactacgatcggcgtggactttaagatccgtacggtggacatcgacggggagcgagtc
aaactgcagatctgggacacggcgggccaggagcgcttcaggaccatcacctcaacgtat
tacagaaatacccacggtgtgattattgtttacgacgtcactaacccagagtcgtttgtg
aacgtgaagaggtggcttaatgagatcactcagaactgtgacaacgtctgtaagatcctg
gtggggaacaagaatgacgacccctccaagaagcaggtggactcccaggatgcaatgtgt
ttcggggagtcggtaggcgtccgggtgtttgagacgagcgccaaagaaaacatcaacgtg
gaagagatgtttatggcgttcactcacatggtccttcggacaaagaagcagagtcagagt
cgtgcagagagagagcgggaacgagagaaggaaacggtcgacatcaactctcacagacac
agagagaggaggaagagggggaagaagtgttgctga
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