Coregonus clupeaformis (lake whitefish): 121550330
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Entry
121550330 CDS
T08357
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121550330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121550330
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121550330
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121550330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF1299
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121550330
NCBI-ProteinID:
XP_041718494
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MSKRAKKNEEAGDDEDNGTAPAAKKGKKVKEPEAPILYSDPPDKMTSKDGRAANMKITSW
NVDGLRAWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDDITSMPEFPHKYWAGSDEKEG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYRKT
WDVDFKAYLSDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFSQLLAAG
FTDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIRNQAMGSD
HCPITLHVVV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagagcgaagaaaaatgaagaggctggagatgacgaagacaacggcacagct
ccggctgccaagaaaggaaagaaggtaaaggaaccagaggcccccattctgtacagtgac
cctcctgataagatgaccagcaaagatggtcgtgctgctaacatgaagatcacctcctgg
aatgtagatgggctcagagcttgggtcaagaagaagggccttgattgggtgcgcgacgag
gccccagatgtgttgtgcctgcaggagacgaagtgtgctgagaagtcccttcctgatgat
atcacctccatgcccgagttcccccacaagtactgggctggctctgatgagaaggagggc
tatagcggggtggctatgctgtgcaagactgagcccctcaaagttacctatggcattggt
aaagaggagcatgacaaggagggccgtgttatcactgctgagttccccaccttcttcctg
gtcaccgcctacgtccccaactctggccgaggactggtgcgcctggactatcgcaagacc
tgggacgtggacttcaaggcctacctgagcgacctggacaagcgcaagcccctggtgctg
tgtggcgatctgaacgtggcccatgaggagatcgacctgaagaactccaaaggcaacaaa
aaaaacgcaggcttcacagcagaggagcgcgaggggttcagccagctgttggccgcaggc
tttaccgacagcttccgcgagctgtaccccgagcaggccaacgcatacaccttctggacc
tacatgatgaactctcggtctaagaacgtgggctggcggctggactactttgtactgtcc
tctgctctactgccaggcctttgcgatagcaagatccgcaaccaagctatgggcagtgac
cactgccccatcactctacatgtggttgtgtag
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