KEGG   Coregonus clupeaformis (lake whitefish): 121550346
Entry
121550346         CDS       T08357                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X3
  KO
K23625  ataxin 2/2L
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121550346 (atxn2l)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121550346 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 121550346
NCBI-ProteinID: XP_041718503
LinkDB
Position
10:complement(63003848..63023559)
AA seq 994 aa
MSFRRQNQQPGSGGRKTSNGTAGPAGLPPHISGNNTNRAVPGRTRNTMKPPSQPSPVFEG
VYNNTRMLHYLTAVVGSTCDVRVKSGNVYEGIFKTLSSRCELVVDAVHKRSEGGEADGDG
GGGLPPSLPRIEEITDTMIFSPGDLVTMTCRDVDLNYAIRDAFTDTAISSSRVNGEHKEK
VLQRWDGGDSNGEGFDLETDTSNGWDASEMFKFNEETYGVTSTYDSSLSMYTVPLERGSS
DGFRQREARAARLANEIEGSPQYRHRTNLENDDKSEEDKYSAVVRERDEGRERGSPGFQS
SAGSREGKYIPLPQRAREMGVSPSSLRGGASGPIPNRTGAPGSSRPSQGSDRSSPLSVRG
AYSPHQSQASPPAQPSTPTPSSSSSHPIPHSISHPQALADASRSSVNGVSSRTSPKAQRS
VQSNRTLRNPSSQSSPAVSRSPKPDDPALAGPIYLDTSSSSIASATPKSSGPTPLFTVDV
NEILSSAAKERTEGPASPQDGKSGKVPSVLQRTQLEELRKFGKEFRLQPSSSPSAGPASS
EPAQPSPSDSATTAESKPAPGHTPSQDPQTGEGSSTTPTSTTPTPSPAPNTASQSSGPDR
QAAGTPQPARTPGSEEGGERAEGVADQVKKSTLNPNAKEFVFKAPMTLVKPSPAPTPPRP
TPPSPSVVLQPPPGQQAIYSTPYLSYLSPVQLQGHSVQAPQMYQYTMSTVQQGKYPRAKG
QVVGPRPDHHGSSQPQMLQAAASAAGPPLVASPYPQAYLQYSQVIQGMPHYPGQPVYSML
QGGARMLTQAGHPQALGPPGPQYPGQTEGPPGPQQAMYAPQQFSHHSSSMHPPQPSSTPT
GSQPPPQHTAPSPGHGQSGQGGPQPQSMYHSGPLSAPTPPNMPPGHSSPQASYPMQGYSL
PTHQPMAQHYPGLGQLTQAHVAQGMSGPHHQGGHGPPQMMLHYAPPPQQGPGSAQQHGPP
PQQGAHQHYYIQHPQAVQVQAHPTQQLSFHPPGN
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgtcttttcgtcgacagaaccaacaacccggttcaggcggacgaaaaacctcgaatgga
acggcagggccagcaggtttaccccctcatatcagcgggaacaataccaacagagctgtg
cctggaaggacaagaaatacaatgaagcctccatctcagccctctcccgtatttgaaggt
gtctacaacaacaccaggatgcttcactatctcaccgctgtagtgggttccacctgtgat
gtccgagtgaagagtggaaatgtgtatgaaggcatcttcaagaccctcagctcaaggtgt
gagctggtggtcgacgcagtccacaagcggagcgagggaggagaggcggatggagacgga
gggggaggcttgcccccctccctgcccaggatcgaggagatcacagacaccatgatcttc
agccccggcgacctggtcacaatgacttgccgagatgtggacctcaactacgccatcaga
gatgctttcacagatacagcaatcagctcatcgcgggtgaacggggagcacaaggagaag
gtgctgcagcggtgggacggaggggacagcaacggagaaggcttcgacctggagacggac
acgtctaatggctgggatgccagcgaaatgttcaagtttaacgaggagacgtatggcgtc
acgtccacctatgattccagcctctccatgtacaccgttcccctggaaaggggcagctcg
gatggcttccggcagcgggaggcacgcgcggcccgcctggcgaatgagatcgagggcagc
ccccagtaccgtcaccgcaccaacctggagaatgacgacaagagcgaggaggacaagtac
agcgctgttgtccgagagagagacgaggggagggagaggggcagccccggattccagagc
agtgccgggagcagggagggtaaatacattcctcttccccagagggccagggagatgggt
gtgtcccccagcagcctgaggggcggagcctctggtccaatacccaatcgaacaggagcc
cctggctcctctagaccctcccagggttctgataggagcagcccactgtccgtcaggggc
gcctactctccccaccagtcccaagccagccccccggcccagcccagcacccctactccc
tcctcttcctcctctcacccgatccctcactccatctctcacccacaagctctggccgat
gcctcacgctcttctgtcaacggagtgtcatccagaacttcccccaaagcccagagatcc
gtacagagcaatagaactctgcgcaacccaagctcccagtcctcacctgcagtctctcgc
tctccaaaaccagacgaccccgctctagctggccccatctacctggacacttcctcctcc
tcgatcgcctcggcaacacccaagtcctctggccccacccctctgttcacggtggatgtg
aatgagatcctgagctcagcggctaaggagaggactgaaggtccagccagccctcaggat
ggcaagagtggcaaagttccctcagtcctgcagagaacacagttggaggagctacggaaa
tttggcaaagagttcaggctccagcccagctcctccccttctgctggccccgcctcctca
gaacccgcccagccctccccatcagactccgccaccacagccgagtccaaacccgcccct
ggccacaccccctcccaggacccccagactggagaggggtcctccaccacccctacctcc
accacccctaccccctctccagcccccaacaccgcctctcagtcatcaggtccagacagg
caggctgcagggacaccccagccagccaggacccctggcagcgaagagggcggcgagcga
gcagagggtgtggctgatcaggtgaagaagtctacgctgaaccccaacgccaaagagttc
gtcttcaaggcacccatgaccctggtgaagccgtccccagcccccacccccccgcggccc
actcctcccagcccctccgtggtgctccagccccccccgggacaacaggccatctacagc
accccctacctgtcctacctctcccccgtacagctacagggacactctgtacaggctccc
cagatgtatcagtacaccatgtctacagtccagcaggggaaatatcccagagctaaaggc
caggtggtaggccctcgtccggaccaccacggctcttctcagccccagatgctccaggct
gcagcgtctgcagcaggccctcccctggtggcctccccctacccccaggcctacctacag
tacagtcaggtcatccagggcatgccccactaccccggacagccggtgtactccatgctg
cagggtggggccaggatgttgactcaggcgggccacccccaggctctgggccccccaggc
ccccagtaccccggacagaccgaggggcccccgggaccacaacaggccatgtatgccccc
cagcagttctcccaccattctagctccatgcaccctccccagccctccagcactcccact
gggagccagccccctccccagcacactgcccccagccctgggcacggacagtcgggccag
ggaggcccccagccccagtccatgtaccactctgggcccctgtcagcgcccacaccccct
aacatgccccctggccacagctctccccaggcctcttaccccatgcagggctacagcctg
cccacccaccagcccatggcccaacactacccaggcctgggacagctcacacaggcccac
gttgcccaaggtatgtctggcccccaccaccaaggaggccacggcccgccccagatgatg
ctgcactacgccccgcccccacagcaaggcccaggctccgcccagcagcatggcccaccc
ccccagcagggggcgcaccaacactactacatccaacacccacaggcagtacaggtgcag
gctcaccccacccagcagctctccttccacccccctggaaactga

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