Coregonus clupeaformis (lake whitefish): 121550389
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Entry
121550389 CDS
T08357
Name
(RefSeq) rab11 family-interacting protein 4A isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121550389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550389
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121550389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_1
EF-hand_6
Shugoshin_N
bZIP_2
SPEF2_C
INO80F
Motif
Other DBs
NCBI-GeneID:
121550389
NCBI-ProteinID:
XP_041718553
LinkDB
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Position
35:complement(12561..108726)
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AA seq
605 aa
AA seq
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MEGNVFPDQEQLLGFLKKLKEVFDVCDEDADGYIRVEHFVDLGLQFGQGDRDEVKKLTKY
LDPNAHGRINFKDFCYGVFAIKGCEEILKTALGPRSVPIQTDNGYIYQNGSARLGPPIIM
CTRPYPDCSVEQGECCDMDSTNESGVGSDGGRGNEKEEGLGGLFNNSGQLIGSASASVIS
GEEQFEDYGEGEDVDYTPSSPCPDDDTRTNGFSDLGSSLPSSAGQTPLKVCHLYNSDVLD
VYCSQCYKKVNLLNDLEARLNNLKANSPNRKISSTAFGRQLFQHNHSAFSSSQGSTEDLF
RDSIDSCDVDITEKVSYLEKKVTELENDNLANGDLKSKLKQGNTQLVHRVHELEEQLKDQ
ESRAEQSLEEEAHRHRETYCKMERDKNTDIELLSNRVQQLEEENGEMKLTVCKLKSQTEK
LDQEKQRMTDRLEDTSLRLKDEMDLYRKMMDKLWQNRHESQKEREAMQELIEDLRRELEY
LQLFKLGSEKGQGAGLSEYNAKTREIEMEHEVKRLKQENFKLRDQNDDLNSQILSLSLYE
AKNLFACHTKVQSLAAEIDNASRDELVDALKEQECVNFRLRQYMDKIILAILDHNPSILE
IKSTS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaacgtcttccccgatcaagaacagcttctagggtttctgaaaaagctcaag
gaggtattcgacgtgtgtgatgaggatgctgatggttacattcgggtcgaacatttcgtg
gatctggggctccagttcgggcagggagaccgagatgaggtgaagaagttgactaagtac
ctggatcccaatgctcacggcaggatcaacttcaaagacttctgctatggagtgttcgcc
atcaagggatgtgaggagattctgaagacagctctgggtcctcgtagtgtacccattcag
actgacaatggatacatctaccagaacggctcggcccgactcggccctcccatcatcatg
tgtacccgtccatacccggactgtagtgtggagcaaggggagtgttgtgacatggacagc
accaatgagagcggggtgggctctgacggggggcggggcaacgagaaggaggaggggcta
ggaggactgttcaacaattctggccagctgattggctcggcttctgcgtccgtcatctcg
ggggaggagcagtttgaggactacggagagggggaggacgtggactacactcccagcagc
ccttgccccgacgatgacacgcgcaccaacggcttctcagacctcggctcctctctgccc
tccagtgctggtcagacccctctgaaagtgtgtcacctgtacaacagtgatgtgttggac
gtgtattgttctcagtgctataagaaggttaacctgctcaacgacctggaggccaggctc
aacaacctcaaagccaacagccccaacagaaagatatccagcactgcctttggacgtcag
ttgttccagcacaaccacagtgcgtttagcagcagtcagggaagcacagaggacctgttc
agagactccatcgactcttgtgatgtggacatcactgagaaggtgagttacctggagaag
aaagtgacagagctggagaatgacaatctggctaatggagacctcaagtctaaactcaaa
cagggcaacacacagctagtacacagggttcatgagttggaggagcagctgaaggatcag
gagagcagagcagaacagagcctagaggaagaggcacatagacacagagagacctactgc
aagatggagagagacaagaacactgacatagagctgctcagtaacagagttcagcagctg
gaggaggagaatggagagatgaaactgactgtgtgtaaactgaagtctcagactgagaaa
ctagaccaggagaagcagcgtatgacagacaggttagaggacaccagtctgaggctgaaa
gatgagatggacctctacaggaagatgatggacaagctgtggcagaacagacatgaatcc
cagaaggagagagaggccatgcaagagttgattgaggacctacgtcgggagttggagtac
ctgcagctgtttaagctgggttcagagaaggggcagggggcggggctatcagaatacaac
gccaagacacgggagatagagatggagcatgaggtcaagagactcaaacaggagaacttt
aagctacgggaccagaacgatgacctgaacagtcagatcctcagtctgagtctgtatgaa
gctaagaacctgtttgcctgccacaccaaggtccagtcactggctgctgagatagacaat
gcttctagggacgagttggtggatgctctgaaggagcaggagtgtgttaacttccgtcta
aggcagtacatggataagatcatcctggctattctggatcacaacccctctatcctggag
attaagagtaccagttaa
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